myRT

myRT report for GCA_001569625.1_ASM156962v1

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Seq: BCOD01000068.1 Salmonella enterica DNA, contig: contig000068, strain: NGUA05, whole genome shotgun sequence (90457 bp)
Overview 1 RT 1: 32531-39784 bp Neighborhood of RT #1 [32531, 39807] HTH_XRE ImmA HTH_XRE RVT-Retrons Phage_int_SAM_2 Integrase_1 COG4643 Feature: gene Location: 32531-33148 bp Feature: gene Location: 33152-34279 bp Feature: domain Description: HTH_XRE Location: 33173-33344 bp Feature: domain Description: HTH_XRE Location: 331 73-33344 bp Feature: domain Description: ImmA Location: 33557-34079 bp Feature: domain Description: ImmA Location: 33557-34079 bp Feature: domain Description: HTH_XRE Location: 34136-34208 bp Feature: domain Description: HTH_XRE Location: 341 36-34208 bp Feature: gene Location: 34422-35567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34662-35295 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34662-35295 bp Feature: gene Location: 35770-36996 bp Feature: gene Location: 37951-39807 bp Feature: domain Description: Phage_int_SAM_2 Location: 37954-38224 bp Feature: domain Description: Phage_int_SAM_2 Location: 37954-38224 bp Feature: domain Description: Integrase_1 Location: 38260-38602 bp Feature: domain Description: Integrase_1 Location: 38260-38602 bp Feature: domain Description: COG4643 Location: 38827-39784 bp Feature: domain Description: COG4643 Location: 38827-39784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), ImmA (COG2856), RVT-Retrons, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), COG4643 (Uncharacterized domain associated with phage/plasmid primase )