myRT

myRT report for GCA_001569825.1_ASM156982v1

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Seq: BCON01000300.1 Salmonella enterica DNA, contig: contig000300, strain: NGUA15, whole genome shotgun sequence (13472 bp)
Overview 1 RT 1: 4553-11829 bp Neighborhood of RT #1 [4553, 11829] Phage_int_SAM_2 Integrase_1 COG4643 RVT-Retrons HTH_XRE ImmA HTH_XRE Feature: gene Location: 4553-6409 bp Feature: domain Description: Phage_int_SAM_2 Location: 4556-4826 bp Feature: domain Description: Phage_int_SAM_2 Location: 4556-4826 bp Feature: domain Description: Integrase_1 Location: 4862-5204 bp Feature: domain Description: Integrase_1 Location: 4862-5204 bp Feature: domain Description: COG4643 Location: 5429-6386 bp Feature: domain Description: COG4643 Location: 5429-6386 bp Feature: gene Location: 7364-8590 bp Feature: gene Location: 8793-9938 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9033-9666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9033-9666 bp Feature: gene Location: 10081-11208 bp Feature: domain Description: HTH_XRE Location: 10102-10273 bp Feature: domain Description: HTH_XRE Location: 1 01 02-1 0273 bp Feature: domain Description: ImmA Location: 10486-11008 bp Feature: domain Description: ImmA Location: 1 0486-1 1 008 bp Feature: domain Description: HTH_XRE Location: 11065-11137 bp Feature: domain Description: HTH_XRE Location: 1 1 065-1 1 1 37 bp Feature: gene Location: 11212-11829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), ImmA (COG2856), Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), RVT-Retrons