myRT

myRT report for GCA_001572325.1_ASM157232v1

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Seq: LPYR01000108.1 Escherichia coli strain CFSAN025117 4277-H-A_contig_199_61.17, whole genome shotgun sequence (1192 bp)
Overview 1 RT 1: 1-1161 bp Neighborhood of RT #1 [1, 1160] RVT_N RVT-GII Feature: gene Location: 1-130 bp Feature: gene Location: 219-1160 bp Feature: domain Description: RVT_N Location: 273-516 bp Feature: domain Description: RVT_N Location: 273-51 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561-1161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 -1 1 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: LPYR01000280.1 Escherichia coli strain CFSAN025117 4277-H-A_contig_97_62.50, whole genome shotgun sequence (7925 bp)
Overview 1 RT 1: 1603-6621 bp Neighborhood of RT #1 [1603, 6621] PRK15223 AfaD-like RVT-UG4 Feature: gene Location: 1603-4188 bp Ori: KXM53644.1 Feature: domain Description: PRK15223 Location: 1651-4183 bp Feature: domain Description: PRK152 2 3 Location: 1651-4183 bp Feature: gene Location: 4263-4655 bp Ori: KXM53649.1 Feature: domain Description: AfaD-like Location: 4290-4635 bp Feature: domain Description: AfaD-like Location: 42 90-4635 bp Feature: gene Location: 5120-5536 bp Ori: KXM53645.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5150-5531 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5150-5531 bp Feature: gene Location: 5673-6173 bp Feature: gene Location: 6409-6621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15223 (fimbrial biogenesis outer membrane usher protein), AfaD-like (cd18776), RVT-UG4