myRT

myRT report for GCA_001572615.1_ASM157261v1

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Seq: LPZI01000271.1 Escherichia coli strain CFSAN025137 5196-B_contig_93_57.29, whole genome shotgun sequence (6768 bp)
Overview 1 RT 1: 148-5161 bp Neighborhood of RT #1 [148, 5166] RVT-UG4 AfaD-like PRK15223 Feature: gene Location: 148-360 bp Feature: gene Location: 596-1096 bp Feature: gene Location: 1233-1649 bp Ori: KXN46298.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1263-1644 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 263-1 644 bp Feature: gene Location: 2114-2506 bp Ori: KXN46300.1 Feature: domain Description: AfaD-like Location: 2141-2486 bp Feature: domain Description: AfaD-like Location: 21 41 -2486 bp Feature: gene Location: 2581-5166 bp Ori: KXN46299.1 Feature: domain Description: PRK15223 Location: 2629-5161 bp Feature: domain Description: PRK1 5223 Location: 2629-51 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, AfaD-like (cd18776), PRK15223 (fimbrial biogenesis outer membrane usher protein)

Seq: LPZI01000159.1 Escherichia coli strain CFSAN025137 5196-B_contig_243_113.43, whole genome shotgun sequence (1234 bp)
Overview 1 RT 1: 208-1150 bp Neighborhood of RT #1 [208, 1149] RVT_N RVT-GII Feature: gene Location: 208-1149 bp Feature: domain Description: RVT_N Location: 262-505 bp Feature: domain Description: RVT_N Location: 2 62 -505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-1150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-1150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII