myRT

myRT report for GCA_001574445.1_ASM157444v1

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Seq: LOCO01000028.1 Marinobacter excellens LAMA 842 Contig28, whole genome shotgun sequence (52884 bp)
Overview 1 RT 1: 7310-19783 bp Neighborhood of RT #1 [7310, 19887] benzo_1_2_benA RVT-GII RVT-GII GIIM DDE_Tnp_1_4 DDE_3 ycfP RVT-GII GIIM TraI_2 Arm-DNA-bind_2 Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 7310-8668 bp Feature: domain Description: benzo_1_2_benA Location: 7355-8648 bp Feature: domain Description: benzo_1 _2_benA Location: 7355-8648 bp Feature: gene Location: 8888-9079 bp Feature: gene Location: 9102-10067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9246-9858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9246-9858 bp Feature: gene Location: 10713-11972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10908-11526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0908-1 1 526 bp Feature: domain Description: GIIM Note: maturase Location: 11577-11799 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 577-1 1 799 bp Feature: gene Location: 12979-14295 bp Feature: domain Description: DDE_Tnp_1_4 Location: 13123-14284 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 31 23-1 4284 bp Feature: gene Location: 14531-15133 bp Feature: domain Description: DDE_3 Location: 14558-14996 bp Feature: domain Description: DDE_3 Location: 1 4558-1 4996 bp Feature: gene Location: 15187-15729 bp Feature: domain Description: ycfP Location: 15199-15712 bp Feature: domain Description: ycfP Location: 1 51 99-1 571 2 bp Feature: gene Location: 15895-17154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16087-16705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6087-1 6705 bp Feature: domain Description: GIIM Note: maturase Location: 16756-16987 bp Feature: domain Description: GIIM Note: maturase Location: 1 6756-1 6987 bp Feature: gene Location: 17811-18764 bp Feature: domain Description: TraI_2 Location: 18159-18432 bp Feature: domain Description: TraI_2 Location: 1 81 59-1 8432 bp Feature: gene Location: 18751-19887 bp Feature: domain Description: Arm-DNA-bind_2 Location: 18754-18862 bp Feature: domain Description: Arm-DNA-bind_2 Location: 1 8754-1 8862 bp Feature: domain Description: Phage_int_SAM_3 Location: 18946-19114 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 8946-1 91 1 4 bp Feature: domain Description: INT_ICEBs1_C_like Location: 19294-19783 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 9294-1 9783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), benzo_1_2_benA (TIGR03229), DDE_3 (pfam13358), ycfP (COG3150), TraI_2 (pfam07514), Arm-DNA-bind_2 (pfam12167), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)

Seq: LOCO01000018.1 Marinobacter excellens LAMA 842 Contig18, whole genome shotgun sequence (95216 bp)
Overview 1 RT 1: 32337-38804 bp Neighborhood of RT #1 [32337, 38818] NarK NarK ANK ANK RVT-GII GIIM NarK USP_Like Feature: gene Location: 32337-33929 bp Feature: domain Description: NarK Location: 32388-33093 bp Feature: domain Description: NarK Location: 32 388-33093 bp Feature: domain Description: NarK Location: 33174-33906 bp Feature: domain Description: NarK Location: 33174-33906 bp Feature: gene Location: 34019-34633 bp Feature: domain Description: ANK Location: 34091-34322 bp Feature: domain Description: ANK Location: 34091-3432 2 bp Feature: domain Description: ANK Location: 34337-34571 bp Feature: domain Description: ANK Location: 34337-34571 bp Feature: gene Location: 34744-36015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34957-35575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34957-35575 bp Feature: domain Description: GIIM Note: maturase Location: 35623-35848 bp Feature: domain Description: GIIM Note: maturase Location: 3562 3-35848 bp Feature: gene Location: 36803-38308 bp Feature: domain Description: NarK Location: 36824-38267 bp Feature: domain Description: NarK Location: 3682 4-382 67 bp Feature: gene Location: 38357-38818 bp Feature: domain Description: USP_Like Location: 38363-38804 bp Feature: domain Description: USP_Like Location: 38363-38804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NarK (COG2223), ANK (smart00248), RVT-GII, GIIM (pfam08388), USP_Like (cd00293)