myRT

myRT report for GCA_001575715.1_ASM157571v1

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Seq: LONI01000013.1 Escherichia coli strain G109 Escherichia_coli_G109.contig.013, whole genome shotgun sequence (191232 bp)
Overview 1 RT 1: 44799-51719 bp Neighborhood of RT #1 [44799, 51838] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP Phage_fiber_2 34 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 44799-46385 bp Feature: domain Description: prfC Location: 44817-46383 bp Feature: domain Description: prfC Location: 4481 7-46383 bp Feature: gene Location: 46605-46865 bp Feature: domain Description: PRK10597 Location: 46608-46848 bp Feature: domain Description: PRK1 0597 Location: 46608-46848 bp Feature: gene Location: 47223-48827 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47514-48105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4751 4-481 05 bp Feature: domain Description: TIR_2 Location: 48432-48765 bp Feature: domain Description: TIR_2 Location: 48432-48765 bp Feature: gene Location: 49272-49856 bp Feature: domain Description: Caudo_TAP Location: 49488-49845 bp Feature: domain Description: Caudo_TAP Location: 49488-49845 bp Feature: gene Location: 49856-51838 bp Feature: domain Description: Phage_fiber_2 Location: 49877-49997 bp Feature: domain Description: Phage_fiber_2 Location: 49877-49997 bp Feature: domain Description: 34 Location: 50591-50930 bp Feature: domain Description: 34 Location: 50591 -50930 bp Feature: domain Description: Collar Location: 51209-51347 bp Feature: domain Description: Collar Location: 51 209-51 347 bp Feature: domain Description: Phage_fiber Location: 51398-51437 bp Feature: domain Description: Phage_fiber Location: 51 398-51 437 bp Feature: domain Description: Phage_fiber Location: 51494-51533 bp Feature: domain Description: Phage_fiber Location: 51 494-51 533 bp Feature: domain Description: Phage_fiber Location: 51539-51566 bp Feature: domain Description: Phage_fiber Location: 51 539-51 566 bp Feature: domain Description: Phage_fiber Location: 51641-51680 bp Feature: domain Description: Phage_fiber Location: 51 641 -51 680 bp Feature: domain Description: Phage_fiber Location: 51686-51719 bp Feature: domain Description: Phage_fiber Location: 51 686-51 71 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), Caudo_TAP (pfam02413), Phage_fiber_2 (pfam03406), 34 (PHA02584), Collar (pfam07484), Phage_fiber (pfam03335)