myRT

myRT report for GCA_001576325.1_ASM157632v1

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Seq: LOOZ01000065.1 Escherichia coli strain G28 Escherichia_coli_G28.contig.065, whole genome shotgun sequence (8272 bp)
Overview 1 RT 1: 1786-7471 bp Neighborhood of RT #1 [1786, 7698] PRK10597 SLATT_5 RVT-UG17 phage_tail_N Peptidase_S74 Feature: gene Location: 1786-2034 bp Ori: KXR85525.1 Feature: domain Description: PRK10597 Location: 1789-2029 bp Feature: domain Description: PRK1 0597 Location: 1 789-2029 bp Feature: gene Location: 2257-2808 bp Ori: KXR85526.1 Feature: domain Description: SLATT_5 Location: 2263-2779 bp Feature: domain Description: SLATT_5 Location: 2263-2779 bp Feature: gene Location: 2786-4156 bp Ori: KXR85527.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3014-3620 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 301 4-3620 bp Feature: gene Location: 4264-4551 bp Feature: gene Location: 4594-7698 bp Ori: KXR85528.1 Feature: domain Description: phage_tail_N Location: 4597-4846 bp Feature: domain Description: phage_tail_N Location: 4597-4846 bp Feature: domain Description: Peptidase_S74 Location: 7324-7471 bp Feature: domain Description: Peptidase_S74 Location: 7324-7471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Peptidase_S74 (pfam13884)

Seq: LOOZ01000077.1 Escherichia coli strain G28 Escherichia_coli_G28.contig.077, whole genome shotgun sequence (4043 bp)
Overview 1 RT 1: 709-4043 bp Neighborhood of RT #1 [709, 4043] RVT-Retrons Feature: gene Location: 709-1809 bp Ori: KXR85019.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 850-1414 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 850-1414 bp Feature: gene Location: 1806-1985 bp Feature: gene Location: 1982-4043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: LOOZ01000055.1 Escherichia coli strain G28 Escherichia_coli_G28.contig.055, whole genome shotgun sequence (11592 bp)
Overview 1 RT 1: 98-3984 bp Neighborhood of RT #1 [98, 4049] RVT-GII group_II_RT_mat WcaA Feature: gene Location: 98-1420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 74-482 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 914-1304 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 914-13 04 bp Feature: gene Location: 2057-3262 bp Feature: gene Location: 3267-4049 bp Ori: KXR85846.1 Feature: domain Description: WcaA Location: 3288-3984 bp Feature: domain Description: WcaA Location: 3 288-3 984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), WcaA (TIGR04017)