myRT

myRT report for GCA_001577345.1_ASM157734v1

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Seq: LSLI01000208.1 Candidatus Gallionella acididurans isolate ShG14-8 contig00900, whole genome shotgun sequence (1901 bp)
Overview 1 RT 1: 321-1452 bp Neighborhood of RT #1 [321, 1817] RVT-GII Feature: gene Location: 321-1817 bp Ori: KXS30546.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1 452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LSLI01000211.1 Candidatus Gallionella acididurans isolate ShG14-8 contig00927, whole genome shotgun sequence (1866 bp)
Overview 1 RT 1: 560-1673 bp Neighborhood of RT #1 [560, 1777] RVT-GII GIIM Feature: gene Location: 560-1777 bp Ori: KXS30537.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-142 4 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1673 bp Feature: domain Description: GIIM Note: maturase Location: 1472 -1673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LSLI01000117.1 Candidatus Gallionella acididurans isolate ShG14-8 contig00125, whole genome shotgun sequence (6830 bp)
Overview 1 RT 1: 1-4244 bp Neighborhood of RT #1 [1, 4246] DUF1738 RVT_N RVT-GII GIIM HNHc N6_N4_Mtase N6_N4_Mtase PRK00024 Feature: gene Location: 1-360 bp Ori: KXS30936.1 Feature: domain Description: DUF1738 Location: 79-334 bp Feature: domain Description: DUF173 8 Location: 79-3 3 4 bp Feature: gene Location: 587-2257 bp Ori: KXS30937.1 Feature: domain Description: RVT_N Location: 641-884 bp Feature: domain Description: RVT_N Location: 641-884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 929-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 929-1571 bp Feature: domain Description: GIIM Note: maturase Location: 1622-1856 bp Feature: domain Description: GIIM Note: maturase Location: 1622-1856 bp Feature: domain Description: HNHc Note: nucleases Location: 2090-2240 bp Feature: domain Description: HNHc Note: nucleases Location: 2090-2240 bp Feature: gene Location: 2853-3686 bp Ori: KXS30938.1 Feature: domain Description: N6_N4_Mtase Location: 2967-3048 bp Feature: domain Description: N6_N4_Mtase Location: 2967-3 048 bp Feature: domain Description: N6_N4_Mtase Location: 3105-3537 bp Feature: domain Description: N6_N4_Mtase Location: 3 105-3 53 7 bp Feature: gene Location: 3683-4246 bp Ori: KXS30939.1 Feature: domain Description: PRK00024 Location: 3806-4244 bp Feature: domain Description: PRK00024 Location: 3 806-4244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), N6_N4_Mtase (pfam01555), PRK00024 (DNA repair protein RadC)

Seq: LSLI01000189.1 Candidatus Gallionella acididurans isolate ShG14-8 contig00567, whole genome shotgun sequence (2399 bp)
Overview 1 RT 1: 625-2269 bp Neighborhood of RT #1 [625, 2286] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 625-2286 bp Ori: KXS30603.1 Feature: domain Description: RVT_N Location: 670-913 bp Feature: domain Description: RVT_N Location: 670-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1600 bp Feature: domain Description: GIIM Note: maturase Location: 1657-1885 bp Feature: domain Description: GIIM Note: maturase Location: 1657-1885 bp Feature: domain Description: HNHc Note: nucleases Location: 2116-2269 bp Feature: domain Description: HNHc Note: nucleases Location: 2116-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)