myRT

myRT report for GCA_001577935.1_CFSAN026599_01.1

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Seq: LSPS01000004.1 Listeria monocytogenes strain CFSAN026599 CFSAN026599_contig0003, whole genome shotgun sequence (270815 bp)
Overview 1 RT 1: 93520-99048 bp Neighborhood of RT #1 [93520, 99059] ALDH_F6_MMSDH GlpR RVT-UG17 SLATT_5 Cass2 Feature: gene Location: 93520-94986 bp Ori: KXS69587.1 Feature: domain Description: ALDH_F6_MMSDH Location: 93544-94963 bp Feature: domain Description: ALDH_F6_MMSDH Location: 93544-94963 bp Feature: gene Location: 95181-95942 bp Ori: KXS69588.1 Feature: domain Description: GlpR Location: 95187-95931 bp Feature: domain Description: GlpR Location: 951 87-95931 bp Feature: gene Location: 96370-97728 bp Ori: KXS69589.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 96595-97168 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 96595-971 68 bp Feature: gene Location: 97725-98324 bp Ori: KXS69590.1 Feature: domain Description: SLATT_5 Location: 97758-98304 bp Feature: domain Description: SLATT_5 Location: 97758-98304 bp Feature: gene Location: 98640-99059 bp Ori: KXS69591.1 Feature: domain Description: Cass2 Location: 98652-99048 bp Feature: domain Description: Cass2 Location: 98652-99048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F6_MMSDH (cd07085), GlpR (COG1349), RVT-UG17, SLATT_5 (pfam18160), Cass2 (pfam14526)

Seq: LSPS01000008.1 Listeria monocytogenes strain CFSAN026599 CFSAN026599_contig0007, whole genome shotgun sequence (27877 bp)
Overview 1 RT 1: 16315-20655 bp Neighborhood of RT #1 [16315, 20666] KOG0882 KOG0882 RVT-UG2 PRK09034 Feature: gene Location: 16315-16899 bp Ori: KXS68615.1 Feature: domain Description: KOG0882 Location: 16366-16672 bp Feature: domain Description: KOG0882 Location: 16366-16672 bp Feature: domain Description: KOG0882 Location: 16759-16897 bp Feature: domain Description: KOG0882 Location: 16759-16897 bp Feature: gene Location: 16924-17202 bp Feature: gene Location: 17384-18754 bp Ori: KXS68617.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 17612-18434 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 17612 -18434 bp Feature: gene Location: 18868-19260 bp Feature: gene Location: 19305-20666 bp Ori: KXS68619.1 Feature: domain Description: PRK09034 Location: 19308-20655 bp Feature: domain Description: PRK09034 Location: 19308-2 0655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0882 (KOG0882, Cyclophilin-related peptidyl-prolyl cis-trans isomerase ), RVT-UG2, PRK09034 (aspartate kinase; Reviewed)