myRT

myRT report for GCA_001580835.1_ASM158083v1

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Seq: LHZM01000059.1 Gluconobacter thailandicus strain LMG 1741 LMG1741_22, whole genome shotgun sequence (25197 bp)
Overview 1 RT 1: 3678-11247 bp Neighborhood of RT #1 [3678, 11273] uvrA PRK06341 RVT-GII Intron_maturas2 HNHc PhnO HTH_31 MLTR_LBD Feature: gene Location: 3678-6671 bp Ori: KXV35705.1 Feature: domain Description: uvrA Location: 3696-6522 bp Feature: domain Description: uvrA Location: 3696-6522 bp Feature: gene Location: 6800-7381 bp Ori: KXV35706.1 Feature: domain Description: PRK06341 Location: 6803-7379 bp Feature: domain Description: PRK06341 Location: 6803-7379 bp Feature: gene Location: 7996-9852 bp Ori: KXV35707.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8287-9100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8287-91 00 bp Feature: domain Description: Intron_maturas2 Location: 9199-9511 bp Feature: domain Description: Intron_maturas2 Location: 91 99-951 1 bp Feature: domain Description: HNHc Note: nucleases Location: 9625-9805 bp Feature: domain Description: HNHc Note: nucleases Location: 9625-9805 bp Feature: gene Location: 10012-10479 bp Ori: KXV35708.1 Feature: domain Description: PhnO Location: 10093-10432 bp Feature: domain Description: PhnO Location: 1 0093-1 0432 bp Feature: gene Location: 10476-11273 bp Ori: KXV35709.1 Feature: domain Description: HTH_31 Location: 10503-10740 bp Feature: domain Description: HTH_31 Location: 1 0503-1 0740 bp Feature: domain Description: MLTR_LBD Location: 10830-11247 bp Feature: domain Description: MLTR_LBD Location: 1 0830-1 1 247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT uvrA (PRK00349), PRK06341 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PhnO (COG0454), HTH_31 (pfam13560), MLTR_LBD (pfam17765)

Seq: LHZM01000053.1 Gluconobacter thailandicus strain LMG 1741 LMG1741_64, whole genome shotgun sequence (18350 bp)
Overview 1 RT 1: 10513-17823 bp Neighborhood of RT #1 [10513, 17843] ACT ACT RutF RVT-UG8 RVT-UG3 YiaG RelE Feature: gene Location: 10513-10899 bp Ori: KXV35878.1 Feature: domain Description: ACT Location: 10525-10657 bp Feature: domain Description: ACT Location: 1052 5-10657 bp Feature: domain Description: ACT Location: 10753-10828 bp Feature: domain Description: ACT Location: 10753-1082 8 bp Feature: gene Location: 10909-11517 bp Ori: KXV35879.1 Feature: domain Description: RutF Location: 10936-11473 bp Feature: domain Description: RutF Location: 10936-11473 bp Feature: gene Location: 12092-14182 bp Ori: KXV35880.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12740-13193 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 740-13193 bp Feature: gene Location: 14172-15548 bp Ori: KXV35881.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 14622-15129 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1462 2 -1512 9 bp Feature: gene Location: 17209-17505 bp Ori: KXV35882.1 Feature: domain Description: YiaG Location: 17296-17479 bp Feature: domain Description: YiaG Location: 172 96-17479 bp Feature: gene Location: 17502-17843 bp Ori: KXV35883.1 Feature: domain Description: RelE Location: 17595-17823 bp Feature: domain Description: RelE Location: 17595-1782 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACT (pfam01842), RutF (TIGR03615), RVT-UG8, RVT-UG3, YiaG (COG2944), RelE (pfam06296)