myRT

myRT report for GCA_001582145.1_ASM158214v1

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Seq: LAXO01000009.1 Legionella pneumophila strain JNLH86 Scaffold8_1, whole genome shotgun sequence (185472 bp)
Overview 1 RT 1: 111889-115721 bp 2 RT 2: 139536-147144 bp 3 RT 3: 163381-169776 bp Neighborhood of RT #1 [111889, 115840] RVT-UG18 COG5421 Neighborhood of RT #2 [139536, 147144] RVT-GII GIIM Neighborhood of RT #3 [163381, 169776] TraA_Ti RVT_N RVT-GII GIIM Feature: gene Location: 111889-112044 bp Feature: gene Location: 112457-113506 bp Feature: gene Location: 113673-114527 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 113742-114324 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 1 1 3742-1 1 4324 bp Feature: gene Location: 114552-114749 bp Feature: gene Location: 114746-115840 bp Feature: domain Description: COG5421 Location: 114929-115721 bp Feature: domain Description: COG5421 Location: 1 1 4929-1 1 5721 bp Feature: gene Location: 139536-140894 bp Feature: gene Location: 141002-141913 bp Feature: gene Location: 142161-143399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142359-143016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42359-1 4301 6 bp Feature: domain Description: GIIM Note: maturase Location: 143097-143307 bp Feature: domain Description: GIIM Note: maturase Location: 1 43097-1 43307 bp Feature: gene Location: 144137-145486 bp Feature: gene Location: 145729-147144 bp Feature: gene Location: 163381-164157 bp Feature: gene Location: 164391-167069 bp Feature: domain Description: TraA_Ti Location: 164421-166584 bp Feature: domain Description: TraA_Ti Location: 1 64421 -1 66584 bp Feature: gene Location: 167827-169314 bp Feature: domain Description: RVT_N Location: 167881-168124 bp Feature: domain Description: RVT_N Location: 1 67881 -1 681 24 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168169-168826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 681 69-1 68826 bp Feature: domain Description: GIIM Note: maturase Location: 168892-169126 bp Feature: domain Description: GIIM Note: maturase Location: 1 68892-1 691 26 bp Feature: gene Location: 169391-169567 bp Feature: gene Location: 169570-169776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18, COG5421 (Transposase ), RVT-GII, GIIM (pfam08388), TraA_Ti (TIGR02768), RVT_N (pfam13655)

Seq: LAXO01000010.1 Legionella pneumophila strain JNLH86 Scaffold9_1, whole genome shotgun sequence (160156 bp)
Overview 1 RT 1: 47149-52082 bp Neighborhood of RT #1 [47149, 52096] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47149-47523 bp Feature: domain Description: Tra_M Location: 47197-47392 bp Feature: domain Description: Tra_M Location: 47197-47392 bp Feature: gene Location: 47983-48135 bp Feature: gene Location: 48371-49891 bp Feature: domain Description: RVT_N Location: 48428-48671 bp Feature: domain Description: RVT_N Location: 4842 8-48671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48716-49340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48716-49340 bp Feature: domain Description: GIIM Note: maturase Location: 49391-49625 bp Feature: domain Description: GIIM Note: maturase Location: 49391-4962 5 bp Feature: gene Location: 49962-51413 bp Feature: domain Description: Tnp_DNA_bind Location: 50001-50169 bp Feature: domain Description: Tnp_DNA_bind Location: 50001-50169 bp Feature: domain Description: DDE_Tnp_1 Location: 50826-51120 bp Feature: domain Description: DDE_Tnp_1 Location: 5082 6-5112 0 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51126-51405 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 5112 6-51405 bp Feature: gene Location: 51719-52096 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51746-52082 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51746-52 082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LAXO01000019.1 Legionella pneumophila strain JNLH86 Scaffold17_1, whole genome shotgun sequence (80602 bp)
Overview 1 RT 1: 21050-26970 bp Neighborhood of RT #1 [21050, 27044] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21050-21322 bp Feature: gene Location: 21650-22015 bp Feature: domain Description: DUF5338 Location: 21659-21866 bp Feature: domain Description: DUF53 3 8 Location: 21659-21866 bp Feature: gene Location: 22320-25409 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22830-23358 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2283 0-23 3 58 bp Feature: gene Location: 25506-25676 bp Feature: gene Location: 25782-27044 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25833-26085 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2583 3 -26085 bp Feature: domain Description: INT_P4_C Location: 26439-26970 bp Feature: domain Description: INT_P4_C Location: 2643 9-26970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)