myRT

myRT report for GCA_001582245.1_ASM158224v1

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Seq: LAXU01000009.1 Legionella pneumophila strain JX1 Scaffold8_1, whole genome shotgun sequence (173381 bp)
Overview 1 RT 1: 60350-65283 bp Neighborhood of RT #1 [60350, 65297] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 60350-60724 bp Feature: domain Description: Tra_M Location: 60398-60593 bp Feature: domain Description: Tra_M Location: 60398-60593 bp Feature: gene Location: 61184-61336 bp Feature: gene Location: 61572-63092 bp Feature: domain Description: RVT_N Location: 61629-61872 bp Feature: domain Description: RVT_N Location: 61 629-61 872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61917-62541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 91 7-62541 bp Feature: domain Description: GIIM Note: maturase Location: 62592-62826 bp Feature: domain Description: GIIM Note: maturase Location: 62592-62826 bp Feature: gene Location: 63163-64614 bp Feature: domain Description: Tnp_DNA_bind Location: 63202-63370 bp Feature: domain Description: Tnp_DNA_bind Location: 63202-63370 bp Feature: domain Description: DDE_Tnp_1 Location: 64027-64321 bp Feature: domain Description: DDE_Tnp_1 Location: 64027-64321 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 64327-64606 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 64327-64606 bp Feature: gene Location: 64920-65297 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 64947-65283 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 64947-65283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LAXU01000018.1 Legionella pneumophila strain JX1 Scaffold17_1, whole genome shotgun sequence (80602 bp)
Overview 1 RT 1: 21050-26970 bp Neighborhood of RT #1 [21050, 27044] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21050-21322 bp Feature: gene Location: 21650-22015 bp Feature: domain Description: DUF5338 Location: 21659-21866 bp Feature: domain Description: DUF5338 Location: 2 1659-2 1866 bp Feature: gene Location: 22320-25409 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22830-23358 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 830-2 3358 bp Feature: gene Location: 25506-25676 bp Feature: gene Location: 25782-27044 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25833-26085 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 5833-2 6085 bp Feature: domain Description: INT_P4_C Location: 26439-26970 bp Feature: domain Description: INT_P4_C Location: 2 6439-2 6970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)