myRT

myRT report for GCA_001582295.1_ASM158229v1

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Seq: LAXW01000010.1 Legionella pneumophila strain SZ099 Scaffold9_1, whole genome shotgun sequence (194042 bp)
Overview 1 RT 1: 141885-146701 bp Neighborhood of RT #1 [141885, 146832] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 141885-142262 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 141912-142248 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 1 41 91 2-1 42248 bp Feature: gene Location: 142568-144019 bp Feature: domain Description: Tnp_DNA_bind Location: 142607-142775 bp Feature: domain Description: Tnp_DNA_bind Location: 1 42607-1 42775 bp Feature: domain Description: DDE_Tnp_1 Location: 143432-143726 bp Feature: domain Description: DDE_Tnp_1 Location: 1 43432-1 43726 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 143732-144011 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1 43732-1 4401 1 bp Feature: gene Location: 144090-145610 bp Feature: domain Description: RVT_N Location: 144147-144390 bp Feature: domain Description: RVT_N Location: 1 441 47-1 44390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144435-145059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 44435-1 45059 bp Feature: domain Description: GIIM Note: maturase Location: 145110-145344 bp Feature: domain Description: GIIM Note: maturase Location: 1 451 1 0-1 45344 bp Feature: gene Location: 145846-145998 bp Feature: gene Location: 146458-146832 bp Feature: domain Description: Tra_M Location: 146506-146701 bp Feature: domain Description: Tra_M Location: 1 46506-1 46701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)

Seq: LAXW01000014.1 Legionella pneumophila strain SZ099 Scaffold13_1, whole genome shotgun sequence (51652 bp)
Overview 1 RT 1: 442-2984 bp Neighborhood of RT #1 [442, 3076] RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 442-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-844 bp Feature: domain Description: RVT_1 Location: 898-1216 bp Feature: domain Description: RVT_1 Location: 898-12 16 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1513 bp Feature: domain Description: GIIM Note: maturase Location: 12 94-1513 bp Feature: gene Location: 2133-2426 bp Feature: domain Description: InsE Location: 2142-2406 bp Feature: domain Description: InsE Location: 2 142 -2 406 bp Feature: gene Location: 2516-3076 bp Feature: domain Description: HTH_23 Location: 2603-2726 bp Feature: domain Description: HTH_2 3 Location: 2 603-2 72 6 bp Feature: domain Description: HTH_33 Location: 2819-2984 bp Feature: domain Description: HTH_33 Location: 2 819-2 984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: LAXW01000017.1 Legionella pneumophila strain SZ099 Scaffold16_1, whole genome shotgun sequence (37256 bp)
Overview 1 RT 1: 33164-37178 bp Neighborhood of RT #1 [33164, 37178] RVT-UG18 Feature: gene Location: 33164-33325 bp Feature: gene Location: 33493-34506 bp Feature: gene Location: 35004-35369 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 35007-35367 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 3 5007-3 53 67 bp Feature: gene Location: 35391-35693 bp Feature: gene Location: 35847-37178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18