myRT

myRT report for GCA_001582325.1_ASM158232v1

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Seq: LAXZ01000003.1 Legionella pneumophila strain Qin1 Scaffold3_1, whole genome shotgun sequence (269142 bp)
Overview 1 RT 1: 86144-90621 bp Neighborhood of RT #1 [86144, 90659] Arm-DNA-bind_3 INT_Rci_Hp1_C YhcG_C RVT_N RVT-GII GIIM DUF1016_N YhcG_C Feature: gene Location: 86144-87367 bp Feature: domain Description: Arm-DNA-bind_3 Location: 86174-86405 bp Feature: domain Description: Arm-DNA-bind_3 Location: 861 74-86405 bp Feature: domain Description: INT_Rci_Hp1_C Location: 86738-87311 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 86738-8731 1 bp Feature: gene Location: 87351-87743 bp Feature: domain Description: YhcG_C Location: 87357-87660 bp Feature: domain Description: YhcG_C Location: 87357-87660 bp Feature: gene Location: 87887-89392 bp Feature: RT Description: RVT_N Location: 87938-88172 bp Feature: RT Description: RVT_N Location: 87938-881 72 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88226-88856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88226-88856 bp Feature: domain Description: GIIM Note: maturase Location: 88913-89144 bp Feature: domain Description: GIIM Note: maturase Location: 8891 3-891 44 bp Feature: gene Location: 89403-89726 bp Feature: gene Location: 89943-90659 bp Feature: domain Description: DUF1016_N Location: 90012-90426 bp Feature: domain Description: DUF1 01 6_N Location: 9001 2-90426 bp Feature: domain Description: YhcG_C Location: 90498-90621 bp Feature: domain Description: YhcG_C Location: 90498-90621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796), YhcG_C, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF1016_N (pfam17761)

Seq: LAXZ01000012.1 Legionella pneumophila strain Qin1 Scaffold10_1, whole genome shotgun sequence (160147 bp)
Overview 1 RT 1: 47141-52074 bp Neighborhood of RT #1 [47141, 52088] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47141-47515 bp Feature: domain Description: Tra_M Location: 47189-47384 bp Feature: domain Description: Tra_M Location: 47189-47384 bp Feature: gene Location: 47975-48127 bp Feature: gene Location: 48363-49883 bp Feature: RT Description: RVT_N Location: 48420-48663 bp Feature: RT Description: RVT_N Location: 4842 0-48663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48708-49332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48708-49332 bp Feature: domain Description: GIIM Note: maturase Location: 49383-49617 bp Feature: domain Description: GIIM Note: maturase Location: 49383-49617 bp Feature: gene Location: 49954-51405 bp Feature: domain Description: Tnp_DNA_bind Location: 49993-50161 bp Feature: domain Description: Tnp_DNA_bind Location: 49993-50161 bp Feature: domain Description: DDE_Tnp_1 Location: 50818-51112 bp Feature: domain Description: DDE_Tnp_1 Location: 50818-51112 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51118-51397 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51118-51397 bp Feature: gene Location: 51711-52088 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51738-52074 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51738-52 074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)