myRT

myRT report for GCA_001582405.1_ASM158240v1

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Seq: LBAA01000001.1 Legionella pneumophila strain FS_10_1101a-3 Scaffold1_1, whole genome shotgun sequence (515004 bp)
Overview 1 RT 1: 263786-270181 bp Neighborhood of RT #1 [263786, 270181] TraA_Ti RVT_N RVT-GII GIIM Feature: gene Location: 263786-264562 bp Feature: gene Location: 264796-267474 bp Feature: domain Description: TraA_Ti Location: 264826-266989 bp Feature: domain Description: TraA_Ti Location: 264826-266989 bp Feature: gene Location: 268232-269719 bp Feature: RT Description: RVT_N Location: 268286-268529 bp Feature: RT Description: RVT_N Location: 268286-268529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268574-269231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268574-269231 bp Feature: domain Description: GIIM Note: maturase Location: 269297-269531 bp Feature: domain Description: GIIM Note: maturase Location: 269297-269531 bp Feature: gene Location: 269796-269972 bp Feature: gene Location: 269975-270181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraA_Ti (TIGR02768), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LBAA01000003.1 Legionella pneumophila strain FS_10_1101a-3 Scaffold3_1, whole genome shotgun sequence (294572 bp)
Overview 1 RT 1: 233587-239040 bp Neighborhood of RT #1 [233587, 239040] Phage_int_SAM_2 RVT-Retrons Trypsin_2 conj_TOL_TraD Feature: gene Location: 233587-234393 bp Feature: domain Description: Phage_int_SAM_2 Location: 233638-233845 bp Feature: domain Description: Phage_int_SAM_2 Location: 2 33638-2 33845 bp Feature: gene Location: 234417-234644 bp Feature: gene Location: 234973-236598 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235102-235705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 35102 -2 35705 bp Feature: domain Description: Trypsin_2 Location: 236089-236509 bp Feature: domain Description: Trypsin_2 Location: 2 36089-2 36509 bp Feature: gene Location: 236780-238714 bp Feature: domain Description: conj_TOL_TraD Location: 236798-238706 bp Feature: domain Description: conj_TOL_TraD Location: 2 36798-2 38706 bp Feature: gene Location: 238711-239040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), RVT-Retrons, Trypsin_2 (pfam13365), conj_TOL_TraD (TIGR03754)

Seq: LBAA01000020.1 Legionella pneumophila strain FS_10_1101a-3 Scaffold17_1, whole genome shotgun sequence (7950 bp)
Overview 1 RT 1: 214-2975 bp Neighborhood of RT #1 [214, 3217] RVT-GII GIIM InsE Methyltransf_31 Feature: gene Location: 214-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-1075 bp Feature: domain Description: GIIM Note: maturase Location: 1156-1372 bp Feature: domain Description: GIIM Note: maturase Location: 1156-13 72 bp Feature: gene Location: 1989-2282 bp Feature: domain Description: InsE Location: 2001-2262 bp Feature: domain Description: InsE Location: 2001-2262 bp Feature: gene Location: 2498-3217 bp Feature: domain Description: Methyltransf_31 Location: 2615-2975 bp Feature: domain Description: Methyltransf_3 1 Location: 2615-2975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), Methyltransf_31 (pfam13847)