myRT

myRT report for GCA_001582535.1_ASM158253v1

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Seq: LBAF01000002.1 Legionella pneumophila strain SZ069 Scaffold2_1, whole genome shotgun sequence (271162 bp)
Overview 1 RT 1: 20966-25866 bp Neighborhood of RT #1 [20966, 26351] RVT_N RVT-GII GIIM TraA_Ti Feature: gene Location: 20966-21172 bp Feature: gene Location: 21175-21351 bp Feature: gene Location: 21428-22915 bp Feature: domain Description: RVT_N Location: 21482-21725 bp Feature: domain Description: RVT_N Location: 21 482-21 725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21770-22427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 770-22427 bp Feature: domain Description: GIIM Note: maturase Location: 22493-22727 bp Feature: domain Description: GIIM Note: maturase Location: 22493-22727 bp Feature: gene Location: 22958-23086 bp Feature: gene Location: 23673-26351 bp Feature: domain Description: TraA_Ti Location: 23703-25866 bp Feature: domain Description: TraA_Ti Location: 23703-25866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraA_Ti (TIGR02768)

Seq: LBAF01000017.1 Legionella pneumophila strain SZ069 Scaffold16_1, whole genome shotgun sequence (92182 bp)
Overview 1 RT 1: 63-2968 bp Neighborhood of RT #1 [63, 3060] PHA02517 RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 63-320 bp Feature: domain Description: PHA02517 Location: 66-282 bp Feature: domain Description: PHA02 517 Location: 66-2 82 bp Feature: gene Location: 426-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630-82 8 bp Feature: domain Description: RVT_1 Location: 882-1200 bp Feature: domain Description: RVT_1 Location: 882 -12 00 bp Feature: domain Description: GIIM Note: maturase Location: 1278-1497 bp Feature: domain Description: GIIM Note: maturase Location: 12 78-1497 bp Feature: gene Location: 2117-2410 bp Feature: domain Description: InsE Location: 2126-2390 bp Feature: domain Description: InsE Location: 2 12 6-2 390 bp Feature: gene Location: 2500-3060 bp Feature: domain Description: HTH_23 Location: 2587-2710 bp Feature: domain Description: HTH_2 3 Location: 2 587-2 710 bp Feature: domain Description: HTH_33 Location: 2803-2968 bp Feature: domain Description: HTH_33 Location: 2 803-2 968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: LBAF01000023.1 Legionella pneumophila strain SZ069 Scaffold22_1, whole genome shotgun sequence (38294 bp)
Overview 1 RT 1: 1202-5301 bp Neighborhood of RT #1 [1202, 5301] RVT-UG18 Feature: gene Location: 1202-2533 bp Feature: gene Location: 2687-2989 bp Feature: gene Location: 3011-3376 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 3014-3374 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 3 014-3 3 74 bp Feature: gene Location: 3874-4887 bp Feature: gene Location: 5158-5301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18

Seq: LBAF01000028.1 Legionella pneumophila strain SZ069 Scaffold27_1, whole genome shotgun sequence (17566 bp)
Overview 1 RT 1: 94-5027 bp Neighborhood of RT #1 [94, 5041] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 94-468 bp Feature: domain Description: Tra_M Location: 142-337 bp Feature: domain Description: Tra_M Location: 14 2-337 bp Feature: gene Location: 928-1080 bp Feature: gene Location: 1316-2836 bp Feature: domain Description: RVT_N Location: 1373-1616 bp Feature: domain Description: RVT_N Location: 1373-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2285 bp Feature: domain Description: GIIM Note: maturase Location: 2336-2570 bp Feature: domain Description: GIIM Note: maturase Location: 2336-2570 bp Feature: gene Location: 2907-4358 bp Feature: domain Description: Tnp_DNA_bind Location: 2946-3114 bp Feature: domain Description: Tnp_DNA_bind Location: 294 6-3114 bp Feature: domain Description: DDE_Tnp_1 Location: 3771-4065 bp Feature: domain Description: DDE_Tnp_1 Location: 3771-4 065 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 4071-4350 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 4 071-4 350 bp Feature: gene Location: 4664-5041 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 4691-5027 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 4 691-5027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)