myRT

myRT report for GCA_001582625.1_ASM158262v1

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Seq: LBAM01000009.1 Legionella pneumophila strain FS_4_1103abu Scaffold7_1, whole genome shotgun sequence (194033 bp)
Overview 1 RT 1: 47202-52135 bp Neighborhood of RT #1 [47202, 52149] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47202-47576 bp Feature: domain Description: Tra_M Location: 47250-47445 bp Feature: domain Description: Tra_M Location: 47250-47445 bp Feature: gene Location: 48036-48188 bp Feature: gene Location: 48424-49944 bp Feature: domain Description: RVT_N Location: 48481-48724 bp Feature: domain Description: RVT_N Location: 48481 -48724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48769-49393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48769-49393 bp Feature: domain Description: GIIM Note: maturase Location: 49444-49678 bp Feature: domain Description: GIIM Note: maturase Location: 49444-49678 bp Feature: gene Location: 50015-51466 bp Feature: domain Description: Tnp_DNA_bind Location: 50054-50222 bp Feature: domain Description: Tnp_DNA_bind Location: 50054-50222 bp Feature: domain Description: DDE_Tnp_1 Location: 50879-51173 bp Feature: domain Description: DDE_Tnp_1 Location: 50879-51 1 73 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51179-51458 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51 1 79-51 458 bp Feature: gene Location: 51772-52149 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51799-52135 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51 799-521 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LBAM01000017.1 Legionella pneumophila strain FS_4_1103abu Scaffold15_1, whole genome shotgun sequence (51541 bp)
Overview 1 RT 1: 68-2973 bp Neighborhood of RT #1 [68, 3065] PHA02517 RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 68-325 bp Feature: domain Description: PHA02517 Location: 71-287 bp Feature: domain Description: PHA02 517 Location: 71-2 87 bp Feature: gene Location: 431-1585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635-833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635-833 bp Feature: domain Description: RVT_1 Location: 887-1205 bp Feature: domain Description: RVT_1 Location: 887-12 05 bp Feature: domain Description: GIIM Note: maturase Location: 1283-1502 bp Feature: domain Description: GIIM Note: maturase Location: 12 83-1502 bp Feature: gene Location: 2122-2415 bp Feature: domain Description: InsE Location: 2131-2395 bp Feature: domain Description: InsE Location: 2 131-2 395 bp Feature: gene Location: 2505-3065 bp Feature: domain Description: HTH_23 Location: 2592-2715 bp Feature: domain Description: HTH_2 3 Location: 2 592 -2 715 bp Feature: domain Description: HTH_33 Location: 2808-2973 bp Feature: domain Description: HTH_33 Location: 2 808-2 973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: LBAM01000021.1 Legionella pneumophila strain FS_4_1103abu Scaffold19_1, whole genome shotgun sequence (37256 bp)
Overview 1 RT 1: 79-4178 bp Neighborhood of RT #1 [79, 4178] RVT-UG18 Feature: gene Location: 79-1410 bp Feature: gene Location: 1564-1866 bp Feature: gene Location: 1888-2253 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1891-2251 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1891-2251 bp Feature: gene Location: 2751-3764 bp Feature: gene Location: 4035-4178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18