myRT

myRT report for GCA_001582715.1_ASM158271v1

Download annotations/find similar RTs

Seq: LBAR01000005.1 Legionella pneumophila strain NX0702 Scaffold5_1, whole genome shotgun sequence (229393 bp)
Overview 1 RT 1: 116379-121312 bp Neighborhood of RT #1 [116379, 121326] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 116379-116753 bp Feature: domain Description: Tra_M Location: 116427-116622 bp Feature: domain Description: Tra_M Location: 1 1 6427-1 1 6622 bp Feature: gene Location: 117213-117365 bp Feature: gene Location: 117601-119121 bp Feature: domain Description: RVT_N Location: 117658-117901 bp Feature: domain Description: RVT_N Location: 1 1 7658-1 1 7901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117946-118570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7946-1 1 8570 bp Feature: domain Description: GIIM Note: maturase Location: 118621-118855 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8621 -1 1 8855 bp Feature: gene Location: 119192-120643 bp Feature: domain Description: Tnp_DNA_bind Location: 119231-119399 bp Feature: domain Description: Tnp_DNA_bind Location: 1 1 9231 -1 1 9399 bp Feature: domain Description: DDE_Tnp_1 Location: 120056-120350 bp Feature: domain Description: DDE_Tnp_1 Location: 1 20056-1 20350 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 120356-120635 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1 20356-1 20635 bp Feature: gene Location: 120949-121326 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 120976-121312 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 1 20976-1 21 31 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LBAR01000015.1 Legionella pneumophila strain NX0702 Scaffold15_1, whole genome shotgun sequence (80674 bp)
Overview 1 RT 1: 21058-26978 bp Neighborhood of RT #1 [21058, 27052] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21058-21330 bp Feature: gene Location: 21658-22023 bp Feature: domain Description: DUF5338 Location: 21667-21874 bp Feature: domain Description: DUF5338 Location: 2 1667-2 1874 bp Feature: gene Location: 22328-25417 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22838-23366 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 838-2 3366 bp Feature: gene Location: 25514-25684 bp Feature: gene Location: 25790-27052 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25841-26093 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 5841-2 6093 bp Feature: domain Description: INT_P4_C Location: 26447-26978 bp Feature: domain Description: INT_P4_C Location: 2 6447-2 6978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)