myRT

myRT report for GCA_001582775.1_ASM158277v1

Download annotations/find similar RTs

Seq: LBAS01000009.1 Legionella pneumophila strain WX2011036 Scaffold8_1, whole genome shotgun sequence (194025 bp)
Overview 1 RT 1: 47202-52135 bp Neighborhood of RT #1 [47202, 52149] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47202-47576 bp Feature: domain Description: Tra_M Location: 47250-47445 bp Feature: domain Description: Tra_M Location: 47250-47445 bp Feature: gene Location: 48036-48188 bp Feature: gene Location: 48424-49944 bp Feature: domain Description: RVT_N Location: 48481-48724 bp Feature: domain Description: RVT_N Location: 48481 -48724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48769-49393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48769-49393 bp Feature: domain Description: GIIM Note: maturase Location: 49444-49678 bp Feature: domain Description: GIIM Note: maturase Location: 49444-49678 bp Feature: gene Location: 50015-51466 bp Feature: domain Description: Tnp_DNA_bind Location: 50054-50222 bp Feature: domain Description: Tnp_DNA_bind Location: 50054-50222 bp Feature: domain Description: DDE_Tnp_1 Location: 50879-51173 bp Feature: domain Description: DDE_Tnp_1 Location: 50879-51 1 73 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51179-51458 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51 1 79-51 458 bp Feature: gene Location: 51772-52149 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51799-52135 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51 799-521 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LBAS01000013.1 Legionella pneumophila strain WX2011036 Scaffold12_1, whole genome shotgun sequence (132052 bp)
Overview 1 RT 1: 128985-131944 bp Neighborhood of RT #1 [128985, 131982] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 Feature: gene Location: 128985-129545 bp Feature: domain Description: HTH_23 Location: 129072-129195 bp Feature: domain Description: HTH_2 3 Location: 12 9072 -12 9195 bp Feature: domain Description: HTH_33 Location: 129288-129453 bp Feature: domain Description: HTH_33 Location: 12 92 88-12 9453 bp Feature: gene Location: 129635-129928 bp Feature: domain Description: InsE Location: 129644-129908 bp Feature: domain Description: InsE Location: 12 9644-12 9908 bp Feature: gene Location: 130465-131619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130669-130867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130669-130867 bp Feature: domain Description: RVT_1 Location: 130921-131239 bp Feature: domain Description: RVT_1 Location: 13092 1-1312 39 bp Feature: domain Description: GIIM Note: maturase Location: 131317-131536 bp Feature: domain Description: GIIM Note: maturase Location: 131317-131536 bp Feature: gene Location: 131725-131982 bp Feature: domain Description: PHA02517 Location: 131728-131944 bp Feature: domain Description: PHA02 517 Location: 13172 8-131944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: LBAS01000018.1 Legionella pneumophila strain WX2011036 Scaffold17_1, whole genome shotgun sequence (37171 bp)
Overview 1 RT 1: 71-4170 bp Neighborhood of RT #1 [71, 4170] RVT-UG18 Feature: gene Location: 71-1402 bp Feature: gene Location: 1556-1858 bp Feature: gene Location: 1880-2245 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1883-2243 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1883 -2243 bp Feature: gene Location: 2743-3756 bp Feature: gene Location: 4027-4170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18