myRT

myRT report for GCA_001582795.1_ASM158279v1

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Seq: KQ973546.1 Legionella pneumophila strain WX2012012 genomic scaffold Scaffold1, whole genome shotgun sequence (918176 bp)
Overview 1 RT 1: 208704-214157 bp Neighborhood of RT #1 [208704, 214157] Phage_int_SAM_2 RVT-Retrons Trypsin_2 conj_TOL_TraD Feature: gene Location: 208704-209510 bp Feature: domain Description: Phage_int_SAM_2 Location: 208755-208962 bp Feature: domain Description: Phage_int_SAM_2 Location: 208755-208962 bp Feature: gene Location: 209534-209761 bp Feature: gene Location: 210090-211715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210219-210822 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 021 9-21 0822 bp Feature: domain Description: Trypsin_2 Location: 211206-211626 bp Feature: domain Description: Trypsin_2 Location: 21 1 206-21 1 626 bp Feature: gene Location: 211897-213831 bp Feature: domain Description: conj_TOL_TraD Location: 211915-213823 bp Feature: domain Description: conj_TOL_TraD Location: 21 1 91 5-21 3823 bp Feature: gene Location: 213828-214157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), RVT-Retrons, Trypsin_2 (pfam13365), conj_TOL_TraD (TIGR03754)

Seq: LBAU01000004.1 Legionella pneumophila strain WX2012012 Scaffold3_1, whole genome shotgun sequence (326034 bp)
Overview 1 RT 1: 71778-78173 bp Neighborhood of RT #1 [71778, 78173] TraA_Ti RVT_N RVT-GII GIIM Feature: gene Location: 71778-72554 bp Feature: gene Location: 72788-75466 bp Feature: domain Description: TraA_Ti Location: 72818-74981 bp Feature: domain Description: TraA_Ti Location: 72 818-74981 bp Feature: gene Location: 76224-77711 bp Feature: RT Description: RVT_N Location: 76278-76521 bp Feature: RT Description: RVT_N Location: 762 78-7652 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76566-77223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76566-772 2 3 bp Feature: domain Description: GIIM Note: maturase Location: 77289-77523 bp Feature: domain Description: GIIM Note: maturase Location: 772 89-7752 3 bp Feature: gene Location: 77788-77964 bp Feature: gene Location: 77967-78173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraA_Ti (TIGR02768), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)