myRT

myRT report for GCA_001582825.1_ASM158282v1

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Seq: KQ973566.1 Legionella pneumophila strain ATCC 33156 genomic scaffold Scaffold19, whole genome shotgun sequence (65315 bp)
Overview 1 RT 1: 54040-58478 bp Neighborhood of RT #1 [54040, 58498] DUF772 RVT-DGRs Avd_like Feature: gene Location: 54040-55047 bp Feature: gene Location: 55128-56588 bp Feature: domain Description: DUF772 Location: 55311-55503 bp Feature: domain Description: DUF772 Location: 5531 1 -55503 bp Feature: gene Location: 56607-57806 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56826-57522 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56826-57522 bp Feature: gene Location: 57764-58024 bp Feature: gene Location: 58145-58498 bp Feature: domain Description: Avd_like Location: 58172-58478 bp Feature: domain Description: Avd_like Location: 581 72-58478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT-DGRs, Avd_like (cd16376)

Seq: KQ973568.1 Legionella pneumophila strain ATCC 33156 genomic scaffold Scaffold21, whole genome shotgun sequence (51495 bp)
Overview 1 RT 1: 359-2901 bp Neighborhood of RT #1 [359, 2993] RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 359-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563-761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563-761 bp Feature: domain Description: RVT_1 Location: 815-1133 bp Feature: domain Description: RVT_1 Location: 815-1133 bp Feature: domain Description: GIIM Note: maturase Location: 1211-1430 bp Feature: domain Description: GIIM Note: maturase Location: 12 11-1430 bp Feature: gene Location: 2050-2343 bp Feature: domain Description: InsE Location: 2059-2323 bp Feature: domain Description: InsE Location: 2 059-2 32 3 bp Feature: gene Location: 2433-2993 bp Feature: domain Description: HTH_23 Location: 2520-2643 bp Feature: domain Description: HTH_2 3 Location: 2 52 0-2 643 bp Feature: domain Description: HTH_33 Location: 2736-2901 bp Feature: domain Description: HTH_33 Location: 2 736-2 901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: LBAV01000361.1 Legionella pneumophila strain ATCC 33156 Scaffold39_1, whole genome shotgun sequence (8112 bp)
Overview 1 RT 1: 39-4138 bp Neighborhood of RT #1 [39, 4138] RVT-UG18 Feature: gene Location: 39-1370 bp Feature: gene Location: 1524-1826 bp Feature: gene Location: 1848-2213 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1851-2211 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1851-2211 bp Feature: gene Location: 2711-3724 bp Feature: gene Location: 3995-4138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18