myRT

myRT report for GCA_001583235.1_CFSAN026596_01.1

Download annotations/find similar RTs

Seq: LUEJ01000004.1 Listeria monocytogenes strain CFSAN026596 CFSAN026596_contig0003, whole genome shotgun sequence (270819 bp)
Overview 1 RT 1: 93520-99048 bp Neighborhood of RT #1 [93520, 99059] ALDH_F6_MMSDH GlpR RVT-UG17 SLATT_5 Cass2 Feature: gene Location: 93520-94986 bp Ori: KXX08864.1 Feature: domain Description: ALDH_F6_MMSDH Location: 93544-94963 bp Feature: domain Description: ALDH_F6_MMSDH Location: 93544-94963 bp Feature: gene Location: 95181-95942 bp Ori: KXX08865.1 Feature: domain Description: GlpR Location: 95187-95931 bp Feature: domain Description: GlpR Location: 951 87-95931 bp Feature: gene Location: 96370-97728 bp Ori: KXX08866.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 96595-97168 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 96595-971 68 bp Feature: gene Location: 97725-98324 bp Ori: KXX08867.1 Feature: domain Description: SLATT_5 Location: 97758-98304 bp Feature: domain Description: SLATT_5 Location: 97758-98304 bp Feature: gene Location: 98640-99059 bp Ori: KXX08868.1 Feature: domain Description: Cass2 Location: 98652-99048 bp Feature: domain Description: Cass2 Location: 98652-99048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F6_MMSDH (cd07085), GlpR (COG1349), RVT-UG17, SLATT_5 (pfam18160), Cass2 (pfam14526)

Seq: LUEJ01000008.1 Listeria monocytogenes strain CFSAN026596 CFSAN026596_contig0007, whole genome shotgun sequence (30081 bp)
Overview 1 RT 1: 18519-22859 bp Neighborhood of RT #1 [18519, 22870] KOG0882 KOG0882 RVT-UG2 PRK09034 Feature: gene Location: 18519-19103 bp Ori: KXX08235.1 Feature: domain Description: KOG0882 Location: 18570-18876 bp Feature: domain Description: KOG0882 Location: 18570-18876 bp Feature: domain Description: KOG0882 Location: 18963-19101 bp Feature: domain Description: KOG0882 Location: 18963-19101 bp Feature: gene Location: 19128-19406 bp Feature: gene Location: 19588-20958 bp Ori: KXX08237.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 19816-20638 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 19816-2 0638 bp Feature: gene Location: 21072-21464 bp Feature: gene Location: 21509-22870 bp Ori: KXX08239.1 Feature: domain Description: PRK09034 Location: 21512-22859 bp Feature: domain Description: PRK09034 Location: 2 1512 -2 2 859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0882 (KOG0882, Cyclophilin-related peptidyl-prolyl cis-trans isomerase ), RVT-UG2, PRK09034 (aspartate kinase; Reviewed)