myRT

myRT report for GCA_001583285.1_CFSAN026602_01.1

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Seq: LUEG01000001.1 Listeria monocytogenes strain CFSAN026602 CFSAN026602_contig0000, whole genome shotgun sequence (1178817 bp)
Overview 1 RT 1: 584756-591622 bp Neighborhood of RT #1 [584756, 592587] DUF3958 DUF3130 RVT-Retrons YtxK COG4748 N6_Mtase Feature: gene Location: 584756-585112 bp Ori: KXW99095.1 Feature: domain Description: DUF3958 Location: 584783-585083 bp Feature: domain Description: DUF3958 Location: 584783-585083 bp Feature: gene Location: 585113-585397 bp Ori: KXW99096.1 Feature: domain Description: DUF3130 Location: 585116-585383 bp Feature: domain Description: DUF31 30 Location: 5851 1 6-585383 bp Feature: gene Location: 585875-587602 bp Ori: KXW99097.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 586001-586601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 586001 -586601 bp Feature: gene Location: 588039-589646 bp Ori: KXW99098.1 Feature: domain Description: YtxK Location: 588069-589098 bp Feature: domain Description: YtxK Location: 588069-589098 bp Feature: gene Location: 589639-592587 bp Ori: KXW99099.1 Feature: domain Description: COG4748 Location: 589714-590113 bp Feature: domain Description: COG4748 Location: 58971 4-5901 1 3 bp Feature: domain Description: N6_Mtase Location: 590698-591622 bp Feature: domain Description: N6_Mtase Location: 590698-591 622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3958 (pfam13125), DUF3130 (pfam11328), RVT-Retrons, YtxK (COG0827), COG4748 (Uncharacterized protein, contains restriction enzyme R protein N terminal (HSDR_N) domain ), N6_Mtase (pfam02384)