myRT

myRT report for GCA_001583495.1_ASM158349v1

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Seq: LQAQ01000116.1 Flammeovirga sp. SJP92 Scaffold8_4, whole genome shotgun sequence (189675 bp)
Overview 1 RT 1: 67302-73637 bp Neighborhood of RT #1 [67302, 73639] SGSH RVT-AbiP2 tk.4 Feature: gene Location: 67302-68852 bp Ori: KXX66791.1 Feature: domain Description: SGSH Location: 67383-68667 bp Feature: domain Description: SGSH Location: 67383-68667 bp Feature: gene Location: 69138-69740 bp Feature: gene Location: 69864-71369 bp Ori: KXX66793.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 70317-70767 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 7031 7-70767 bp Feature: gene Location: 72220-73110 bp Feature: gene Location: 73184-73639 bp Ori: KXX66795.1 Feature: domain Description: tk.4 Location: 73196-73637 bp Feature: domain Description: tk.4 Location: 731 96-73637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGSH (cd16027), RVT-AbiP2, tk.4

Seq: LQAQ01000077.1 Flammeovirga sp. SJP92 Scaffold4_15, whole genome shotgun sequence (8454 bp)
Overview 1 RT 1: 15-3510 bp Neighborhood of RT #1 [15, 3510] RVT-GII GIIM Feature: gene Location: 15-1289 bp Ori: KXX69330.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210-825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 10-82 5 bp Feature: domain Description: GIIM Note: maturase Location: 897-1125 bp Feature: domain Description: GIIM Note: maturase Location: 897-112 5 bp Feature: gene Location: 1385-2149 bp Feature: gene Location: 2638-3510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LQAQ01000072.1 Flammeovirga sp. SJP92 Scaffold4_10, whole genome shotgun sequence (27782 bp)
Overview 1 RT 1: 2563-9992 bp Neighborhood of RT #1 [2563, 10003] Tra8 WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep RVT-GII GIIM DUF262 COG4938 Feature: gene Location: 2563-3129 bp Ori: KXX69446.1 Feature: domain Description: Tra8 Location: 2569-2761 bp Feature: domain Description: Tra8 Location: 2569-2761 bp Feature: gene Location: 3814-5481 bp Ori: KXX69447.1 Feature: domain Description: WG_beta_rep Location: 3832-3937 bp Feature: domain Description: WG_beta_rep Location: 3 83 2-3 93 7 bp Feature: domain Description: WG_beta_rep Location: 3943-4042 bp Feature: domain Description: WG_beta_rep Location: 3 943 -4042 bp Feature: domain Description: WG_beta_rep Location: 4042-4147 bp Feature: domain Description: WG_beta_rep Location: 4042-4147 bp Feature: domain Description: WG_beta_rep Location: 4147-4252 bp Feature: domain Description: WG_beta_rep Location: 4147-4252 bp Feature: domain Description: WG_beta_rep Location: 4390-4489 bp Feature: domain Description: WG_beta_rep Location: 43 90-4489 bp Feature: domain Description: WG_beta_rep Location: 4489-4597 bp Feature: domain Description: WG_beta_rep Location: 4489-4597 bp Feature: domain Description: WG_beta_rep Location: 4765-4837 bp Feature: domain Description: WG_beta_rep Location: 4765-483 7 bp Feature: domain Description: WG_beta_rep Location: 4837-4933 bp Feature: domain Description: WG_beta_rep Location: 483 7-493 3 bp Feature: domain Description: WG_beta_rep Location: 4951-5047 bp Feature: domain Description: WG_beta_rep Location: 4951-5047 bp Feature: domain Description: WG_beta_rep Location: 5053-5158 bp Feature: domain Description: WG_beta_rep Location: 5053 -5158 bp Feature: domain Description: WG_beta_rep Location: 5167-5266 bp Feature: domain Description: WG_beta_rep Location: 5167-5266 bp Feature: domain Description: WG_beta_rep Location: 5266-5389 bp Feature: domain Description: WG_beta_rep Location: 5266-53 89 bp Feature: gene Location: 5581-6855 bp Ori: KXX69448.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5776-6391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5776-63 91 bp Feature: domain Description: GIIM Note: maturase Location: 6463-6691 bp Feature: domain Description: GIIM Note: maturase Location: 6463 -6691 bp Feature: gene Location: 7741-8862 bp Ori: KXX69449.1 Feature: domain Description: DUF262 Location: 7915-8323 bp Feature: domain Description: DUF262 Location: 7915-83 23 bp Feature: gene Location: 8855-10003 bp Ori: KXX69450.1 Feature: domain Description: COG4938 Location: 8858-9992 bp Feature: domain Description: COG493 8 Location: 8858-9992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), WG_beta_rep (pfam14903), RVT-GII, GIIM (pfam08388), DUF262 (pfam03235), COG4938 (Predicted ATPase )

Seq: LQAQ01000028.1 Flammeovirga sp. SJP92 Scaffold27_1, whole genome shotgun sequence (1372 bp)
Overview 1 RT 1: 86-1196 bp Neighborhood of RT #1 [86, 1360] RVT-GII GIIM Feature: gene Location: 86-1360 bp Ori: KXX71362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-896 bp Feature: domain Description: GIIM Note: maturase Location: 968-1196 bp Feature: domain Description: GIIM Note: maturase Location: 968-1196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)