myRT

myRT report for GCA_001583565.1_ASM158356v1

Download annotations/find similar RTs

Seq: LBAL01000005.1 Legionella pneumophila strain WX2011029 Scaffold3_1, whole genome shotgun sequence (280922 bp)
Overview 1 RT 1: 70229-75134 bp Neighborhood of RT #1 [70229, 75682] conj_TOL_TraD RVT-Retrons Trypsin_2 Phage_int_SAM_2 Feature: gene Location: 70229-70558 bp Feature: gene Location: 70555-72489 bp Feature: domain Description: conj_TOL_TraD Location: 70573-72481 bp Feature: domain Description: conj_TOL_TraD Location: 70573-72481 bp Feature: gene Location: 72671-74296 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72800-73403 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72800-73403 bp Feature: domain Description: Trypsin_2 Location: 73787-74207 bp Feature: domain Description: Trypsin_2 Location: 73787-74207 bp Feature: gene Location: 74625-74852 bp Feature: gene Location: 74873-75682 bp Feature: domain Description: Phage_int_SAM_2 Location: 74927-75134 bp Feature: domain Description: Phage_int_SAM_2 Location: 74927-751 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_TOL_TraD (TIGR03754), RVT-Retrons, Trypsin_2 (pfam13365), Phage_int_SAM_2 (pfam12834)

Seq: LBAL01000027.1 Legionella pneumophila strain WX2011029 Scaffold23_1, whole genome shotgun sequence (39729 bp)
Overview 1 RT 1: 15475-21915 bp Neighborhood of RT #1 [15475, 21941] PRK13729 PRK13733 RVT_N RVT-GII GIIM TraC-F-type Feature: gene Location: 15475-16848 bp Feature: domain Description: PRK13729 Location: 15499-16816 bp Feature: domain Description: PRK1372 9 Location: 15499-16816 bp Feature: gene Location: 16845-17042 bp Feature: domain Description: PRK13733 Location: 16860-17007 bp Feature: domain Description: PRK13733 Location: 16860-17007 bp Feature: gene Location: 17585-19060 bp Feature: RT Description: RVT_N Location: 17645-17888 bp Feature: RT Description: RVT_N Location: 17645-17888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17939-18560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17939-18560 bp Feature: domain Description: GIIM Note: maturase Location: 18611-18845 bp Feature: domain Description: GIIM Note: maturase Location: 18611-18845 bp Feature: gene Location: 19054-19353 bp Feature: gene Location: 19314-21941 bp Feature: domain Description: TraC-F-type Location: 19506-21915 bp Feature: domain Description: TraC-F-type Location: 19506-2 1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13729 (conjugal transfer pilus assembly protein TraB; Provisional), PRK13733 (conjugal transfer protein TraV; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraC-F-type (TIGR02746)