myRT

myRT report for GCA_001583575.1_ASM158357v1

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Seq: LAVQ01000002.1 Legionella pneumophila strain SZ2012006 Scaffold2_1, whole genome shotgun sequence (413099 bp)
Overview 1 RT 1: 162903-167803 bp Neighborhood of RT #1 [162903, 168288] RVT_N RVT-GII GIIM TraA_Ti Feature: gene Location: 162903-163109 bp Feature: gene Location: 163112-163288 bp Feature: gene Location: 163365-164852 bp Feature: domain Description: RVT_N Location: 163419-163662 bp Feature: domain Description: RVT_N Location: 1 6341 9-1 63662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163707-164364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 63707-1 64364 bp Feature: domain Description: GIIM Note: maturase Location: 164430-164664 bp Feature: domain Description: GIIM Note: maturase Location: 1 64430-1 64664 bp Feature: gene Location: 164895-165023 bp Feature: gene Location: 165610-168288 bp Feature: domain Description: TraA_Ti Location: 165640-167803 bp Feature: domain Description: TraA_Ti Location: 1 65640-1 67803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraA_Ti (TIGR02768)

Seq: LAVQ01000008.1 Legionella pneumophila strain SZ2012006 Scaffold8_1, whole genome shotgun sequence (194063 bp)
Overview 1 RT 1: 47194-52127 bp Neighborhood of RT #1 [47194, 52141] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47194-47568 bp Feature: domain Description: Tra_M Location: 47242-47437 bp Feature: domain Description: Tra_M Location: 472 42 -47437 bp Feature: gene Location: 48028-48180 bp Feature: gene Location: 48416-49936 bp Feature: domain Description: RVT_N Location: 48473-48716 bp Feature: domain Description: RVT_N Location: 48473-48716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48761-49385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48761-49385 bp Feature: domain Description: GIIM Note: maturase Location: 49436-49670 bp Feature: domain Description: GIIM Note: maturase Location: 49436-49670 bp Feature: gene Location: 50007-51458 bp Feature: domain Description: Tnp_DNA_bind Location: 50046-50214 bp Feature: domain Description: Tnp_DNA_bind Location: 50046-502 14 bp Feature: domain Description: DDE_Tnp_1 Location: 50871-51165 bp Feature: domain Description: DDE_Tnp_1 Location: 50871-51165 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51171-51450 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51171-51450 bp Feature: gene Location: 51764-52141 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51791-52127 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51791-52 12 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: LAVQ01000013.1 Legionella pneumophila strain SZ2012006 Scaffold12_1, whole genome shotgun sequence (132036 bp)
Overview 1 RT 1: 128977-131936 bp Neighborhood of RT #1 [128977, 131974] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 Feature: gene Location: 128977-129537 bp Feature: domain Description: HTH_23 Location: 129064-129187 bp Feature: domain Description: HTH_23 Location: 129064-129187 bp Feature: domain Description: HTH_33 Location: 129280-129445 bp Feature: domain Description: HTH_3 3 Location: 129280-129445 bp Feature: gene Location: 129627-129920 bp Feature: domain Description: InsE Location: 129636-129900 bp Feature: domain Description: InsE Location: 12963 6-129900 bp Feature: gene Location: 130457-131611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130661-130859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 0661-13 0859 bp Feature: domain Description: RVT_1 Location: 130913-131231 bp Feature: domain Description: RVT_1 Location: 13 0913 -13 123 1 bp Feature: domain Description: GIIM Note: maturase Location: 131309-131528 bp Feature: domain Description: GIIM Note: maturase Location: 13 13 09-13 1528 bp Feature: gene Location: 131717-131974 bp Feature: domain Description: PHA02517 Location: 131720-131936 bp Feature: domain Description: PHA02517 Location: 13 1720-13 193 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: LAVQ01000018.1 Legionella pneumophila strain SZ2012006 Scaffold16_1, whole genome shotgun sequence (37155 bp)
Overview 1 RT 1: 63-4162 bp Neighborhood of RT #1 [63, 4162] RVT-UG18 Feature: gene Location: 63-1394 bp Feature: gene Location: 1548-1850 bp Feature: gene Location: 1872-2237 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1875-2235 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1875-2235 bp Feature: gene Location: 2735-3748 bp Feature: gene Location: 4019-4162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18