myRT

myRT report for GCA_001583955.1_ASM158395v1

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Seq: LOMP01000081.1 Bacillus cereus strain FSL K6-0267 contig_28, whole genome shotgun sequence (58311 bp)
Overview 1 RT 1: 21304-27011 bp 2 RT 2: 45958-50849 bp Neighborhood of RT #1 [21304, 27292] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [45958, 50849] PinE RVT_N RVT-GII GIIM HNHc T_den_put_tspse Feature: gene Location: 21304-22353 bp Feature: domain Description: DDE_Tnp_1 Location: 21664-22348 bp Feature: domain Description: DDE_Tnp_1 Location: 21 664-22348 bp Feature: gene Location: 22514-22693 bp Feature: gene Location: 22867-24171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23152-23791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 52-23791 bp Feature: domain Description: GIIM Note: maturase Location: 23866-24091 bp Feature: domain Description: GIIM Note: maturase Location: 23866-24091 bp Feature: gene Location: 25358-25558 bp Feature: gene Location: 25856-27292 bp Feature: domain Description: DDE_Tnp_1 Location: 26213-27011 bp Feature: domain Description: DDE_Tnp_1 Location: 2621 3-2701 1 bp Feature: gene Location: 45958-46518 bp Feature: domain Description: PinE Location: 45970-46516 bp Feature: domain Description: PinE Location: 45970-4651 6 bp Feature: gene Location: 47106-47435 bp Feature: gene Location: 47438-49264 bp Feature: RT Description: RVT_N Location: 47486-47729 bp Feature: RT Description: RVT_N Location: 47486-47729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47786-48455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47786-48455 bp Feature: domain Description: GIIM Note: maturase Location: 48515-48749 bp Feature: domain Description: GIIM Note: maturase Location: 4851 5-48749 bp Feature: domain Description: HNHc Note: nucleases Location: 48947-49115 bp Feature: domain Description: HNHc Note: nucleases Location: 48947-491 1 5 bp Feature: gene Location: 49338-49982 bp Feature: domain Description: T_den_put_tspse Location: 49344-49974 bp Feature: domain Description: T_den_put_tspse Location: 49344-49974 bp Feature: gene Location: 50550-50849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), PinE (COG1961), RVT_N (pfam13655), HNHc (smart00507), T_den_put_tspse (TIGR01784)