myRT

myRT report for GCA_001583975.1_ASM158397v1

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Seq: LONG01000153.1 Bacillus cereus strain FSL M8-0117 contig_7, whole genome shotgun sequence (193276 bp)
Overview 1 RT 1: 174130-179931 bp Neighborhood of RT #1 [174130, 179931] SSL2 RVT-UG2 Feature: gene Location: 174130-174447 bp Feature: gene Location: 174449-176332 bp Ori: KXY70694.1 Feature: domain Description: SSL2 Location: 174482-175607 bp Feature: domain Description: SSL2 Location: 1 74482-1 75607 bp Feature: gene Location: 176859-178187 bp Ori: KXY70695.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 177048-177873 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 77048-1 77873 bp Feature: gene Location: 178345-179205 bp Feature: gene Location: 179263-179931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT-UG2

Seq: LONG01000143.1 Bacillus cereus strain FSL M8-0117 contig_60, whole genome shotgun sequence (21324 bp)
Overview 1 RT 1: 1-5942 bp Neighborhood of RT #1 [1, 5942] TraG_VirD4 TraG_VirD4 RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 1-417 bp Feature: gene Location: 501-2240 bp Feature: domain Description: TraG_VirD4 Location: 1065-1743 bp Feature: domain Description: TraG_VirD4 Location: 1065-1743 bp Feature: domain Description: TraG_VirD4 Location: 2034-2193 bp Feature: domain Description: TraG_VirD4 Location: 2 034-2 193 bp Feature: gene Location: 2804-4612 bp Ori: KXY71464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068-3890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068-3890 bp Feature: domain Description: Intron_maturas2 Location: 3962-4292 bp Feature: domain Description: Intron_maturas2 Location: 3962 -42 92 bp Feature: domain Description: HNHc Note: nucleases Location: 4427-4583 bp Feature: domain Description: HNHc Note: nucleases Location: 442 7-4583 bp Feature: gene Location: 4717-5742 bp Feature: domain Description: TraG-D_C Location: 4720-5041 bp Feature: domain Description: TraG-D_C Location: 472 0-5041 bp Feature: gene Location: 5739-5942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_VirD4, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: LONG01000131.1 Bacillus cereus strain FSL M8-0117 contig_5, whole genome shotgun sequence (250022 bp)
Overview 1 RT 1: 212424-218593 bp 2 RT 2: 238841-244160 bp Neighborhood of RT #1 [212424, 218628] DUF4238 RVT-UG7 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like DUF4870 Neighborhood of RT #2 [238841, 244237] ArsP_1 YraQ RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 212424-213041 bp Feature: gene Location: 214043-214504 bp Ori: KXY73038.1 Feature: domain Description: DUF4238 Location: 214085-214424 bp Feature: domain Description: DUF423 8 Location: 214085-214424 bp Feature: gene Location: 214742-216337 bp Ori: KXY73039.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 215204-215588 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 215204-215588 bp Feature: gene Location: 216913-218025 bp Ori: KXY73040.1 Feature: domain Description: Arm-DNA-bind_4 Location: 216952-217087 bp Feature: domain Description: Arm-DNA-bind_4 Location: 216952-217087 bp Feature: domain Description: Phage_int_SAM_3 Location: 217117-217279 bp Feature: domain Description: Phage_int_SAM_3 Location: 217117-217279 bp Feature: domain Description: INT_ICEBs1_C_like Location: 217441-217972 bp Feature: domain Description: INT_ICEBs1_C_like Location: 217441-217972 bp Feature: gene Location: 218290-218628 bp Ori: KXY73041.1 Feature: domain Description: DUF4870 Location: 218332-218593 bp Feature: domain Description: DUF4870 Location: 2183 3 2-218593 bp Feature: gene Location: 238841-239368 bp Ori: KXY73063.1 Feature: domain Description: ArsP_1 Location: 238934-239357 bp Feature: domain Description: ArsP_1 Location: 23 893 4-23 93 57 bp Feature: gene Location: 239365-239790 bp Ori: KXY73072.1 Feature: domain Description: YraQ Location: 239380-239776 bp Feature: domain Description: YraQ Location: 23 93 80-23 9776 bp Feature: gene Location: 239906-241729 bp Ori: KXY73064.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240170-241004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240170-241004 bp Feature: domain Description: Intron_maturas2 Location: 241076-241379 bp Feature: domain Description: Intron_maturas2 Location: 241076-2413 79 bp Feature: domain Description: HNHc Note: nucleases Location: 241550-241703 bp Feature: domain Description: HNHc Note: nucleases Location: 241550-241703 bp Feature: gene Location: 242501-244237 bp Ori: KXY73073.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242759-243464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242759-243 464 bp Feature: domain Description: HNHc Note: nucleases Location: 244028-244160 bp Feature: domain Description: HNHc Note: nucleases Location: 244028-244160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4238 (pfam14022), RVT-UG7, Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), DUF4870 (pfam09685), ArsP_1 (pfam03773), YraQ (COG0701), RVT-GII, Intron_maturas2 (pfam01348)
HNHc (smart00507)

Seq: LONG01000164.1 Bacillus cereus strain FSL M8-0117 contig_8, whole genome shotgun sequence (178190 bp)
Overview 1 RT 1: 27518-34977 bp Neighborhood of RT #1 [27518, 36986] PRK13922 PRK13927 RVT-GII HNHc DNA_BRE_C HTH_17 HTH_17 Feature: gene Location: 27518-28369 bp Ori: KXY69761.1 Feature: domain Description: PRK13922 Location: 27524-28346 bp Feature: domain Description: PRK13922 Location: 27524 -2834 6 bp Feature: gene Location: 28411-29430 bp Ori: KXY69762.1 Feature: domain Description: PRK13927 Location: 28429-29419 bp Feature: domain Description: PRK13927 Location: 284 29-294 19 bp Feature: gene Location: 29752-31623 bp Ori: KXY69763.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30073-30781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30073-30781 bp Feature: domain Description: HNHc Note: nucleases Location: 31375-31543 bp Feature: domain Description: HNHc Note: nucleases Location: 31375-3154 3 bp Feature: gene Location: 32564-33985 bp Ori: KXY69764.1 Feature: domain Description: DNA_BRE_C Location: 33242-33821 bp Feature: domain Description: DNA_BRE_C Location: 3324 2-33821 bp Feature: gene Location: 33945-36986 bp Ori: KXY69765.1 Feature: domain Description: HTH_17 Location: 34191-34329 bp Feature: domain Description: HTH_17 Location: 34 191-34 329 bp Feature: domain Description: HTH_17 Location: 34800-34977 bp Feature: domain Description: HTH_17 Location: 34 800-34 977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), DNA_BRE_C (cl00213), HTH_17 (pfam12728)