myRT

myRT report for GCA_001590765.1_ASM159076v1

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Seq: LTDN01000009.1 Serratia plymuthica strain HRO-C48 SOD10_contig000009, whole genome shotgun sequence (7609 bp)
Overview 1 RT 1: 4529-7402 bp Neighborhood of RT #1 [4529, 7402] PRK15287 PRK15288 RVT-UG4 Feature: gene Location: 4529-5005 bp Ori: KYG18146.1 Feature: domain Description: PRK15287 Location: 4556-5003 bp Feature: domain Description: PRK1 5287 Location: 4556-5003 bp Feature: gene Location: 5020-5547 bp Ori: KYG18147.1 Gene: mrpA_1 Feature: domain Description: PRK15288 Location: 5023-5542 bp Feature: domain Description: PRK1 5288 Location: 5023-5542 bp Feature: gene Location: 5540-6505 bp Ori: KYG18148.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5879-6326 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5879-6326 bp Feature: gene Location: 6563-7402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), PRK15288 (putative minor fimbrial subunit StfG; Provisional), RVT-UG4

Seq: LTDN01000049.1 Serratia plymuthica strain HRO-C48 SOD10_contig000049, whole genome shotgun sequence (164523 bp)
Overview 1 RT 1: 3174-6470 bp Neighborhood of RT #1 [3174, 6490] PRK15287 PRK15288 RVT-UG4 PRK09413 Feature: gene Location: 3174-3650 bp Ori: KYG15508.1 Feature: domain Description: PRK15287 Location: 3201-3648 bp Feature: domain Description: PRK152 87 Location: 32 01-3648 bp Feature: gene Location: 3665-4192 bp Ori: KYG15509.1 Gene: mrpA_3 Feature: domain Description: PRK15288 Location: 3668-4187 bp Feature: domain Description: PRK152 88 Location: 3668-4187 bp Feature: gene Location: 4185-5150 bp Ori: KYG15510.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4524-4971 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 452 4-4971 bp Feature: gene Location: 5208-6047 bp Feature: gene Location: 6260-6490 bp Ori: KYG15512.1 Feature: domain Description: PRK09413 Location: 6263-6470 bp Feature: domain Description: PRK09413 Location: 62 63-6470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), PRK15288 (putative minor fimbrial subunit StfG; Provisional), RVT-UG4, PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: LTDN01000044.1 Serratia plymuthica strain HRO-C48 SOD10_contig000044, whole genome shotgun sequence (193200 bp)
Overview 1 RT 1: 16315-21299 bp Neighborhood of RT #1 [16315, 21299] ABC_ATPase DUF3732 RVT-UG11 Feature: gene Location: 16315-16803 bp Feature: gene Location: 16800-18761 bp Ori: KYG15854.1 Feature: domain Description: ABC_ATPase Location: 16839-17277 bp Feature: domain Description: ABC_ATPase Location: 1683 9-17277 bp Feature: domain Description: DUF3732 Location: 18177-18711 bp Feature: domain Description: DUF3 73 2 Location: 18177-18711 bp Feature: gene Location: 18937-19704 bp Ori: KYG15855.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 19069-19522 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 19069-19522 bp Feature: gene Location: 19691-19846 bp Feature: gene Location: 20592-21299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ATPase (pfam09818), DUF3732 (pfam12532), RVT-UG11