myRT

myRT report for GCA_001590865.1_ASM159086v1

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Seq: BBUY01000046.1 Streptomyces sp. NBRC 110611 DNA, contig: scaffold00046, whole genome shotgun sequence (9040 bp)
Overview 1 RT 1: 2783-8314 bp Neighborhood of RT #1 [2783, 8340] DDE_5 RVT-GII GIIM DDE_5 LasB M4_TLP Feature: gene Location: 2783-3547 bp Feature: domain Description: DDE_5 Location: 2855-3530 bp Feature: domain Description: DDE_5 Location: 2855-3530 bp Feature: gene Location: 3758-3952 bp Feature: gene Location: 4526-5968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847-5534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847-5534 bp Feature: domain Description: GIIM Note: maturase Location: 5600-5828 bp Feature: domain Description: GIIM Note: maturase Location: 5600-5828 bp Feature: gene Location: 6128-6337 bp Feature: domain Description: DDE_5 Location: 6134-6275 bp Feature: domain Description: DDE_5 Location: 61 34-6275 bp Feature: gene Location: 6580-8340 bp Feature: domain Description: LasB Location: 6751-7144 bp Feature: domain Description: LasB Location: 6751 -71 44 bp Feature: domain Description: M4_TLP Location: 7423-8314 bp Feature: domain Description: M4_TLP Location: 7423-831 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-GII, GIIM (pfam08388), LasB (COG3227), M4_TLP (cd09597)

Seq: BBUY01000052.1 Streptomyces sp. NBRC 110611 DNA, contig: scaffold00052, whole genome shotgun sequence (5262 bp)
Overview 1 RT 1: 3-1394 bp Neighborhood of RT #1 [3, 1429] RVT-GII InsE PRK06526 Feature: gene Location: 3-539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-333 bp Feature: gene Location: 648-1064 bp Feature: domain Description: InsE Location: 720-972 bp Feature: domain Description: InsE Location: 72 0-972 bp Feature: gene Location: 1103-1429 bp Feature: domain Description: PRK06526 Location: 1187-1394 bp Feature: domain Description: PRK0652 6 Location: 1187-1394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, InsE (COG2963)

Seq: BBUY01000040.1 Streptomyces sp. NBRC 110611 DNA, contig: scaffold00040, whole genome shotgun sequence (17321 bp)
Overview 1 RT 1: 931-3652 bp Neighborhood of RT #1 [931, 3652] RVT-GII GIIM COG3464 Feature: gene Location: 931-2385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255-1951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255-1951 bp Feature: domain Description: GIIM Note: maturase Location: 2020-2242 bp Feature: domain Description: GIIM Note: maturase Location: 2020-2242 bp Feature: gene Location: 2508-2849 bp Feature: domain Description: COG3464 Location: 2565-2796 bp Feature: domain Description: COG3 464 Location: 2565-2796 bp Feature: gene Location: 3293-3652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: BBUY01000021.1 Streptomyces sp. NBRC 110611 DNA, contig: scaffold00021, whole genome shotgun sequence (100546 bp)
Overview 1 RT 1: 3935-8006 bp Neighborhood of RT #1 [3935, 8023] COG4584 RVT-GII GIIM DUF772 Feature: gene Location: 3935-4195 bp Feature: gene Location: 4152-5003 bp Feature: domain Description: COG4584 Location: 4167-4548 bp Feature: domain Description: COG4 584 Location: 4 167-4 54 8 bp Feature: gene Location: 5200-6309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5206-5863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5206-5863 bp Feature: domain Description: GIIM Note: maturase Location: 5935-6166 bp Feature: domain Description: GIIM Note: maturase Location: 5935-6166 bp Feature: gene Location: 7129-7740 bp Feature: gene Location: 7733-8023 bp Feature: domain Description: DUF772 Location: 7886-8006 bp Feature: domain Description: DUF772 Location: 7886-8006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)