myRT

myRT report for GCA_001591065.1_ASM159106v1

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Seq: BCUB01000033.1 Vibrio vulnificus NBRC 15645 = ATCC 27562 DNA, contig: VIBVU1_CON0033_0001, whole genome shotgun sequence (50202 bp)
Overview 1 RT 1: 33826-46369 bp Neighborhood of RT #1 [33826, 46389] HTH_29 DDE_3 AE_Prim_S_like RVT-UG10 PRK09726 SLATT_5 RVT-UG17 SMC_prok_B PRK03918 Feature: gene Location: 33826-34020 bp Feature: domain Description: HTH_29 Location: 33838-33994 bp Feature: domain Description: HTH_29 Location: 33838-33994 bp Feature: gene Location: 34175-34495 bp Feature: domain Description: DDE_3 Location: 34196-34376 bp Feature: domain Description: DDE_3 Location: 341 96-34376 bp Feature: gene Location: 35046-40373 bp Feature: domain Description: AE_Prim_S_like Location: 35121-35430 bp Feature: domain Description: AE_Prim_S_like Location: 351 21 -35430 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 36381-37038 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 36381 -37038 bp Feature: gene Location: 40526-40654 bp Feature: gene Location: 40778-41044 bp Feature: domain Description: PRK09726 Location: 40793-41000 bp Feature: domain Description: PRK09726 Location: 40793-41 000 bp Feature: gene Location: 41502-42137 bp Feature: domain Description: SLATT_5 Location: 41508-42099 bp Feature: domain Description: SLATT_5 Location: 41 508-42099 bp Feature: gene Location: 42139-43470 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 42367-42970 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 42367-42970 bp Feature: gene Location: 43828-45387 bp Feature: domain Description: SMC_prok_B Location: 44770-45286 bp Feature: domain Description: SMC_prok_B Location: 44770-45286 bp Feature: gene Location: 45619-46389 bp Feature: domain Description: PRK03918 Location: 45928-46369 bp Feature: domain Description: PRK0391 8 Location: 45928-46369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), DDE_3 (pfam13358), AE_Prim_S_like (cl01287), RVT-UG10, PRK09726 (type II toxin-antitoxin system antitoxin HipB), SLATT_5 (pfam18160), RVT-UG17, SMC_prok_B (TIGR02168), PRK03918 (DNA double-strand break repair ATPase Rad50)

Seq: BCUB01000073.1 Vibrio vulnificus NBRC 15645 = ATCC 27562 DNA, contig: VIBVU1_CON0073_0001, whole genome shotgun sequence (1959 bp)
Overview 1 RT 1: 84-1227 bp Neighborhood of RT #1 [84, 1328] RVT-GII GIIM Feature: gene Location: 84-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 46-939 bp Feature: domain Description: GIIM Note: maturase Location: 1023-1227 bp Feature: domain Description: GIIM Note: maturase Location: 102 3-12 2 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)