myRT

myRT report for GCA_001591465.1_ASM159146v1

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Seq: BCUY01000010.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0010_0001, whole genome shotgun sequence (84983 bp)
Overview 1 RT 1: 17461-29634 bp Neighborhood of RT #1 [17461, 29987] SbsC_C CopC YvpB SbsC_C RVT-GII GIIM RVT-GII GIIM RVT-GII SbsC_C Peptidase_S41_CPP Feature: gene Location: 17461-20196 bp Feature: domain Description: SbsC_C Location: 17626-18010 bp Feature: domain Description: SbsC_C Location: 1 7626-1 801 0 bp Feature: domain Description: CopC Location: 19093-19303 bp Feature: domain Description: CopC Location: 1 9093-1 9303 bp Feature: gene Location: 20858-22471 bp Feature: domain Description: YvpB Location: 20969-21542 bp Feature: domain Description: YvpB Location: 20969-21 542 bp Feature: domain Description: SbsC_C Location: 21863-22277 bp Feature: domain Description: SbsC_C Location: 21 863-22277 bp Feature: gene Location: 22546-23124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22552-22681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22552-22681 bp Feature: domain Description: GIIM Note: maturase Location: 22729-22942 bp Feature: domain Description: GIIM Note: maturase Location: 22729-22942 bp Feature: gene Location: 23213-24541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23501-24155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23501 -241 55 bp Feature: domain Description: GIIM Note: maturase Location: 24236-24464 bp Feature: domain Description: GIIM Note: maturase Location: 24236-24464 bp Feature: gene Location: 24974-25672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25169-25646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 69-25646 bp Feature: gene Location: 26274-28484 bp Feature: domain Description: SbsC_C Location: 26433-26814 bp Feature: domain Description: SbsC_C Location: 26433-2681 4 bp Feature: gene Location: 28605-29987 bp Feature: domain Description: Peptidase_S41_CPP Location: 28686-29634 bp Feature: domain Description: Peptidase_S41 _CPP Location: 28686-29634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbsC_C (pfam18058), CopC (pfam04234), YvpB (COG4990), RVT-GII, GIIM (pfam08388), Peptidase_S41_CPP (cd07560)

Seq: BCUY01000048.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0048_0001, whole genome shotgun sequence (30749 bp)
Overview 1 RT 1: 10575-16612 bp Neighborhood of RT #1 [10575, 16612] SIR2_2 RVT-UG2 DNA_methylase DNA_methylase Feature: gene Location: 10575-11699 bp Feature: domain Description: SIR2_2 Location: 11016-11610 bp Feature: domain Description: SIR2 _2 Location: 11016-11610 bp Feature: gene Location: 11701-11919 bp Feature: gene Location: 12043-13392 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12271-13099 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 2 71-13099 bp Feature: gene Location: 13504-14754 bp Feature: domain Description: DNA_methylase Location: 13672-14335 bp Feature: domain Description: DNA_methylase Location: 13672 -14335 bp Feature: domain Description: DNA_methylase Location: 14359-14683 bp Feature: domain Description: DNA_methylase Location: 14359-14683 bp Feature: gene Location: 14891-16612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-UG2, DNA_methylase (pfam00145)

Seq: BCUY01000084.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0084_0001, whole genome shotgun sequence (15545 bp)
Overview 1 RT 1: 3-4087 bp Neighborhood of RT #1 [3, 4089] HU RVT-GII Intron_maturas2 HNHc PRK10753 FolE Feature: gene Location: 3-206 bp Feature: gene Location: 403-693 bp Feature: domain Description: HU Location: 469-661 bp Feature: domain Description: HU Location: 469-661 bp Feature: gene Location: 1294-3108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-23 71 bp Feature: domain Description: Intron_maturas2 Location: 2443-2728 bp Feature: domain Description: Intron_maturas2 Location: 2443 -2728 bp Feature: domain Description: HNHc Note: nucleases Location: 2908-3082 bp Feature: domain Description: HNHc Note: nucleases Location: 2908-3 082 bp Feature: gene Location: 3119-3304 bp Feature: domain Description: PRK10753 Location: 3227-3302 bp Feature: domain Description: PRK10753 Location: 3 227-3 3 02 bp Feature: gene Location: 3526-4089 bp Feature: domain Description: FolE Location: 3535-4087 bp Feature: domain Description: FolE Location: 3 53 5-4087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU (cd13831), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK10753 (DNA-binding protein HU-alpha), FolE (COG0302)

Seq: BCUY01000176.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0176_0001, whole genome shotgun sequence (2437 bp)
Overview 1 RT 1: 530-2030 bp Neighborhood of RT #1 [530, 2350] RVT-GII Intron_maturas2 Feature: gene Location: 530-2350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794 -1625 bp Feature: domain Description: Intron_maturas2 Location: 1694-2030 bp Feature: domain Description: Intron_maturas2 Location: 1694 -2030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BCUY01000185.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0185_0001, whole genome shotgun sequence (2158 bp)
Overview 1 RT 1: 94-2156 bp Neighborhood of RT #1 [94, 2156] RVT-GII GIIM Feature: gene Location: 94-1539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-95 8 bp Feature: domain Description: GIIM Note: maturase Location: 1030-1228 bp Feature: domain Description: GIIM Note: maturase Location: 1030-1228 bp Feature: gene Location: 2022-2156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BCUY01000193.1 Bacillus firmus NBRC 15306 DNA, contig: BFI01S_CON0193_0001, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 84-1892 bp Neighborhood of RT #1 [84, 1892] RVT-GII GIIM Feature: gene Location: 84-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-903 bp Feature: domain Description: GIIM Note: maturase Location: 951-1158 bp Feature: domain Description: GIIM Note: maturase Location: 951-1158 bp Feature: gene Location: 1656-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)