myRT

myRT report for GCA_001591625.1_ASM159162v1

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Seq: BCVG01000001.1 Bacillus fastidiosus NBRC 101226 DNA, contig: BFA01S_CON0001_0001, whole genome shotgun sequence (134179 bp)
Overview 1 RT 1: 22533-26906 bp 2 RT 2: 54701-64139 bp Neighborhood of RT #1 [22533, 26953] PRTRC_ThiF RVT-GII Csn1 PRTRC_A Neighborhood of RT #2 [54701, 64139] PRK06751 SSB_OBF RVT-GII U5_2-snRNA_bdg HNH_4 RVT-GII HNHc dnaG Feature: gene Location: 22533-23426 bp Feature: domain Description: PRTRC_ThiF Location: 22578-23379 bp Feature: domain Description: PRTRC_ThiF Location: 22578-23379 bp Feature: gene Location: 23478-23675 bp Feature: gene Location: 23841-25655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24099-24846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24099-24846 bp Feature: domain Description: Csn1 Location: 25335-25515 bp Feature: domain Description: Csn1 Location: 25335-2551 5 bp Feature: gene Location: 25959-26105 bp Feature: gene Location: 26420-26953 bp Feature: domain Description: PRTRC_A Location: 26489-26906 bp Feature: domain Description: PRTRC_A Location: 26489-26906 bp Feature: gene Location: 54701-55198 bp Feature: domain Description: PRK06751 Location: 54719-55196 bp Feature: domain Description: PRK06751 Location: 5471 9-551 96 bp Feature: gene Location: 55225-55530 bp Feature: domain Description: SSB_OBF Location: 55243-55507 bp Feature: domain Description: SSB_OBF Location: 55243-55507 bp Feature: gene Location: 55880-57652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56138-56837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 38-56837 bp Feature: domain Description: U5_2-snRNA_bdg Location: 56855-57089 bp Feature: domain Description: U5_2-snRNA_bdg Location: 56855-57089 bp Feature: domain Description: HNH_4 Location: 57440-57512 bp Feature: domain Description: HNH_4 Location: 57440-5751 2 bp Feature: gene Location: 58627-60576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59053-59764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59053-59764 bp Feature: domain Description: HNHc Note: nucleases Location: 60328-60460 bp Feature: domain Description: HNHc Note: nucleases Location: 60328-60460 bp Feature: gene Location: 61158-62222 bp Feature: domain Description: dnaG Location: 61260-61773 bp Feature: domain Description: dnaG Location: 61 260-61 773 bp Feature: gene Location: 62934-64139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Csn1 (cd09643), PRTRC_A (TIGR03735), PRK06751 (single-stranded DNA-binding protein; Provisional), SSB_OBF (cd04496), U5_2-snRNA_bdg (pfam10597), HNH_4 (pfam13395), HNHc (smart00507), dnaG (TIGR01391)

Seq: BCVG01000059.1 Bacillus fastidiosus NBRC 101226 DNA, contig: BFA01S_CON0059_0001, whole genome shotgun sequence (25844 bp)
Overview 1 RT 1: 14454-19018 bp Neighborhood of RT #1 [14454, 19018] RVT-UG14 HTH_TioE_rpt1 HTH_TioE_rpt1 Feature: gene Location: 14454-15041 bp Feature: gene Location: 15052-15561 bp Feature: gene Location: 15864-17408 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 16215-16572 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 162 15-16572 bp Feature: gene Location: 17685-18404 bp Feature: domain Description: HTH_TioE_rpt1 Location: 17733-18015 bp Feature: domain Description: HTH_TioE_rpt1 Location: 17733-18015 bp Feature: domain Description: HTH_TioE_rpt1 Location: 18066-18342 bp Feature: domain Description: HTH_TioE_rpt1 Location: 18066-18342 bp Feature: gene Location: 18521-19018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, HTH_TioE_rpt1 (cd04772)

Seq: BCVG01000094.1 Bacillus fastidiosus NBRC 101226 DNA, contig: BFA01S_CON0094_0001, whole genome shotgun sequence (14467 bp)
Overview 1 RT 1: 9455-14233 bp Neighborhood of RT #1 [9455, 14247] HAD_HPP CspC RVT-GII fabG FMN_nitrolo Feature: gene Location: 9455-10246 bp Feature: domain Description: HAD_HPP Location: 9473-10232 bp Feature: domain Description: HAD_HPP Location: 9473 -1023 2 bp Feature: gene Location: 10538-10738 bp Feature: domain Description: CspC Location: 10541-10733 bp Feature: domain Description: CspC Location: 10541-1073 3 bp Feature: gene Location: 11079-11567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11265-11436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11265-1143 6 bp Feature: gene Location: 12107-12862 bp Feature: domain Description: fabG Location: 12113-12860 bp Feature: domain Description: fabG Location: 12113 -12860 bp Feature: gene Location: 12940-14247 bp Feature: domain Description: FMN_nitrolo Location: 12973-14233 bp Feature: domain Description: FMN_nitrolo Location: 12973 -1423 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_HPP (cd07517), CspC (COG1278), RVT-GII, fabG (PRK12825), FMN_nitrolo (TIGR03860)