myRT

myRT report for GCA_001592505.1_ASM159250v1

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Seq: BBUS01000009.1 Escherichia coli O119:H6 DNA, contig: 3481_1_85contig0009, strain: 3481-1/85, whole genome shotgun sequence (185678 bp)
Overview 1 RT 1: 1-7900 bp Neighborhood of RT #1 [1, 7902] phage_tail_N ABC_SMC2_euk Collar Caudo_TAP RVT-UG17 SLATT_5 prfC Feature: gene Location: 1-3036 bp Feature: domain Description: phage_tail_N Location: 4-280 bp Feature: domain Description: phage_tail_N Location: 4-280 bp Feature: domain Description: ABC_SMC2_euk Location: 367-1336 bp Feature: domain Description: ABC_SMC2_euk Location: 367-1 336 bp Feature: domain Description: Collar Location: 2356-2494 bp Feature: domain Description: Collar Location: 2356-2494 bp Feature: gene Location: 3036-3620 bp Feature: domain Description: Caudo_TAP Location: 3252-3609 bp Feature: domain Description: Caudo_TAP Location: 3252-3609 bp Feature: gene Location: 3733-5103 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3961-4567 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3961 -4567 bp Feature: gene Location: 5081-5785 bp Feature: domain Description: SLATT_5 Location: 5243-5753 bp Feature: domain Description: SLATT_5 Location: 5243-5753 bp Feature: gene Location: 6316-7902 bp Feature: domain Description: prfC Location: 6334-7900 bp Feature: domain Description: prfC Location: 6334-7900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), Collar (pfam07484), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)

Seq: BBUS01000016.1 Escherichia coli O119:H6 DNA, contig: 3481_1_85contig0016, strain: 3481-1/85, whole genome shotgun sequence (115697 bp)
Overview 1 RT 1: 100007-105290 bp Neighborhood of RT #1 [100007, 105295] DinI RVT-Retrons Q P Feature: gene Location: 100007-100240 bp Feature: domain Description: DinI Location: 100049-100235 bp Feature: domain Description: DinI Location: 100049-1002 35 bp Feature: gene Location: 100328-100489 bp Feature: gene Location: 100522-102462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100846-101470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100846-101470 bp Feature: gene Location: 102504-103529 bp Feature: domain Description: Q Location: 102510-103524 bp Feature: domain Description: Q Location: 102 510-10352 4 bp Feature: gene Location: 103529-105295 bp Feature: domain Description: P Location: 103556-105290 bp Feature: domain Description: P Location: 103556-1052 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)