myRT

myRT report for GCA_001592545.1_ASM159254v1

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Seq: BBUU01000006.1 Escherichia coli O119:H6 DNA, contig: EC175_02contig0006, strain: EC175/02, whole genome shotgun sequence (185376 bp)
Overview 1 RT 1: 177461-184793 bp Neighborhood of RT #1 [177461, 185335] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N ABC_SMC2_euk Collar Feature: gene Location: 177461-179047 bp Feature: domain Description: prfC Location: 177479-179045 bp Feature: domain Description: prfC Location: 1 77479-1 79045 bp Feature: gene Location: 179578-180282 bp Feature: domain Description: SLATT_5 Location: 179740-180250 bp Feature: domain Description: SLATT_5 Location: 1 79740-1 80250 bp Feature: gene Location: 180260-181630 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 180488-181094 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 80488-1 81 094 bp Feature: gene Location: 181743-182327 bp Feature: domain Description: Caudo_TAP Location: 181959-182316 bp Feature: domain Description: Caudo_TAP Location: 1 81 959-1 8231 6 bp Feature: gene Location: 182327-185335 bp Feature: domain Description: phage_tail_N Location: 182330-182579 bp Feature: domain Description: phage_tail_N Location: 1 82330-1 82579 bp Feature: domain Description: ABC_SMC2_euk Location: 182666-183635 bp Feature: domain Description: ABC_SMC2_euk Location: 1 82666-1 83635 bp Feature: domain Description: Collar Location: 184655-184793 bp Feature: domain Description: Collar Location: 1 84655-1 84793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), Collar (pfam07484)

Seq: BBUU01000011.1 Escherichia coli O119:H6 DNA, contig: EC175_02contig0011, strain: EC175/02, whole genome shotgun sequence (114650 bp)
Overview 1 RT 1: 12314-17597 bp Neighborhood of RT #1 [12314, 17602] P Q RVT-Retrons DinI Feature: gene Location: 12314-14080 bp Feature: domain Description: P Location: 12341-14075 bp Feature: domain Description: P Location: 12 341-14075 bp Feature: gene Location: 14080-15105 bp Feature: domain Description: Q Location: 14086-15100 bp Feature: domain Description: Q Location: 14086-15100 bp Feature: gene Location: 15147-17087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15471-16095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15471-16095 bp Feature: gene Location: 17120-17281 bp Feature: gene Location: 17369-17602 bp Feature: domain Description: DinI Location: 17411-17597 bp Feature: domain Description: DinI Location: 17411-17597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DinI (pfam06183)