myRT

myRT report for GCA_001592595.1_ASM159259v1

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Seq: BBUW01000020.1 Escherichia coli O119:H6 DNA, contig: EC404_03contig0020, strain: EC404/03, whole genome shotgun sequence (85530 bp)
Overview 1 RT 1: 69838-75121 bp Neighborhood of RT #1 [69838, 75126] DinI RVT-Retrons Q P Feature: gene Location: 69838-70071 bp Feature: domain Description: DinI Location: 69880-70066 bp Feature: domain Description: DinI Location: 69880-70066 bp Feature: gene Location: 70159-70320 bp Feature: gene Location: 70353-72293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70677-71301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70677-71 301 bp Feature: gene Location: 72335-73360 bp Feature: domain Description: Q Location: 72341-73355 bp Feature: domain Description: Q Location: 72341 -73355 bp Feature: gene Location: 73360-75126 bp Feature: domain Description: P Location: 73387-75121 bp Feature: domain Description: P Location: 73387-751 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: BBUW01000046.1 Escherichia coli O119:H6 DNA, contig: EC404_03contig0046, strain: EC404/03, whole genome shotgun sequence (29173 bp)
Overview 1 RT 1: 21236-28568 bp Neighborhood of RT #1 [21236, 29110] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N ABC_SMC2_euk Collar Feature: gene Location: 21236-22822 bp Feature: domain Description: prfC Location: 21254-22820 bp Feature: domain Description: prfC Location: 2 12 54-2 2 82 0 bp Feature: gene Location: 23353-24057 bp Feature: domain Description: SLATT_5 Location: 23515-24025 bp Feature: domain Description: SLATT_5 Location: 2 3515-2 402 5 bp Feature: gene Location: 24035-25405 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24263-24869 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 42 63-2 4869 bp Feature: gene Location: 25518-26102 bp Feature: domain Description: Caudo_TAP Location: 25734-26091 bp Feature: domain Description: Caudo_TAP Location: 2 5734-2 6091 bp Feature: gene Location: 26102-29110 bp Feature: domain Description: phage_tail_N Location: 26105-26354 bp Feature: domain Description: phage_tail_N Location: 2 6105-2 6354 bp Feature: domain Description: ABC_SMC2_euk Location: 26441-27410 bp Feature: domain Description: ABC_SMC2 _euk Location: 2 6441-2 7410 bp Feature: domain Description: Collar Location: 28430-28568 bp Feature: domain Description: Collar Location: 2 8430-2 8568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), Collar (pfam07484)