myRT

myRT report for GCA_001592935.1_ASM159293v1

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Seq: LRDB01000050.1 Roseivirga echinicomitans strain KMM 6058 contig_6, whole genome shotgun sequence (700662 bp)
Overview 1 RT 1: 272458-277652 bp Neighborhood of RT #1 [272458, 277690] PLN02541 RVT-Retrons MepB PRK05371 Feature: gene Location: 272458-273225 bp Ori: KYG72881.1 Feature: domain Description: PLN02541 Location: 272791-273040 bp Feature: domain Description: PLN02541 Location: 272791 -273040 bp Feature: gene Location: 273228-273548 bp Feature: gene Location: 273733-274752 bp Ori: KYG72883.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 273958-274510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 273958-27451 0 bp Feature: gene Location: 274982-275491 bp Ori: KYG72884.1 Feature: domain Description: MepB Location: 275063-275423 bp Feature: domain Description: MepB Location: 275063-275423 bp Feature: gene Location: 275849-277690 bp Ori: KYG72885.1 Feature: domain Description: PRK05371 Location: 275906-277652 bp Feature: domain Description: PRK05371 Location: 275906-277652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02541 (uracil phosphoribosyltransferase), RVT-Retrons, MepB (pfam08877), PRK05371 (x-prolyl-dipeptidyl aminopeptidase; Provisional)

Seq: LRDB01000002.1 Roseivirga echinicomitans strain KMM 6058 contig_10, whole genome shotgun sequence (296699 bp)
Overview 1 RT 1: 188325-197312 bp Neighborhood of RT #1 [188325, 198886] PepSY_TM_like_2 PepSY_TM_like_2 M14-like RVT-UG28b VirE_N PriCT_2 M14-like Feature: gene Location: 188325-188885 bp Ori: KYG82795.1 Feature: domain Description: PepSY_TM_like_2 Location: 188376-188505 bp Feature: domain Description: PepSY_TM_like_2 Location: 188376-188505 bp Feature: domain Description: PepSY_TM_like_2 Location: 188619-188880 bp Feature: domain Description: PepSY_TM_like_2 Location: 188619-188880 bp Feature: gene Location: 189398-192070 bp Ori: KYG82796.1 Feature: domain Description: M14-like Location: 189776-190406 bp Feature: domain Description: M14-like Location: 189776-190406 bp Feature: gene Location: 192788-194533 bp Ori: KYG82797.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 193229-193952 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 1932 2 9-193952 bp Feature: gene Location: 194687-195688 bp Ori: KYG82798.1 Feature: domain Description: VirE_N Location: 194873-195242 bp Feature: domain Description: VirE_N Location: 194873-1952 42 bp Feature: domain Description: PriCT_2 Location: 195431-195659 bp Feature: domain Description: PriCT_2 Location: 195431-195659 bp Feature: gene Location: 196328-198886 bp Ori: KYG82799.1 Feature: domain Description: M14-like Location: 196679-197312 bp Feature: domain Description: M14-like Location: 196679-197312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepSY_TM_like_2 (pfam16357), M14-like (cd06905), RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707)