myRT

myRT report for GCA_001594015.1_ASM159401v1

Download annotations/find similar RTs

Seq: LTBC01000003.1 Moorella mulderi DSM 14980 MOMU_contig000003, whole genome shotgun sequence (365686 bp)
Overview 1 RT 1: 28-5280 bp Neighborhood of RT #1 [28, 5645] DDE_Tnp_IS66 DDE_Tnp_IS66_C HTH_Tnp_ISL3 RVT-GII GIIM DDE_Tnp_1_4 PRK04914 PRK04914 Feature: gene Location: 28-678 bp Ori: KYH32448.1 Feature: domain Description: DDE_Tnp_IS66 Location: 31-502 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 -502 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 520-640 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 520-640 bp Feature: gene Location: 998-1165 bp Ori: KYH32449.1 Feature: domain Description: HTH_Tnp_ISL3 Location: 1022-1145 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 022-1 1 45 bp Feature: gene Location: 1373-1927 bp Ori: KYH32450.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-1589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 403-1 589 bp Feature: domain Description: GIIM Note: maturase Location: 1670-1877 bp Feature: domain Description: GIIM Note: maturase Location: 1 670-1 877 bp Feature: gene Location: 2242-2673 bp Ori: KYH32451.1 Feature: domain Description: DDE_Tnp_1_4 Location: 2299-2668 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 2299-2668 bp Feature: gene Location: 2895-5645 bp Ori: KYH32452.1 Gene: rapA_1 Feature: domain Description: PRK04914 Location: 3120-3753 bp Feature: domain Description: PRK0491 4 Location: 31 20-3753 bp Feature: domain Description: PRK04914 Location: 4416-5280 bp Feature: domain Description: PRK0491 4 Location: 441 6-5280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), HTH_Tnp_ISL3 (pfam13542), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), PRK04914 (RNA polymerase-associated protein RapA)

Seq: LTBC01000024.1 Moorella mulderi DSM 14980 MOMU_contig000024, whole genome shotgun sequence (16691 bp)
Overview 1 RT 1: 1733-6627 bp Neighborhood of RT #1 [1733, 6671] PilE RVT-GII GIIM PulG spore_V_K Feature: gene Location: 1733-2149 bp Feature: gene Location: 2178-2660 bp Ori: KYH30647.1 Gene: epsG_2 Feature: domain Description: PilE Location: 2211-2400 bp Feature: domain Description: PilE Location: 2 2 11-2 400 bp Feature: gene Location: 2763-4175 bp Ori: KYH30648.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108-3726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108-372 6 bp Feature: domain Description: GIIM Note: maturase Location: 3783-4008 bp Feature: domain Description: GIIM Note: maturase Location: 3783-4008 bp Feature: gene Location: 4627-5160 bp Ori: KYH30649.1 Gene: pulG_2 Feature: domain Description: PulG Location: 4666-4996 bp Feature: domain Description: PulG Location: 4666-4996 bp Feature: gene Location: 5349-6671 bp Ori: KYH30650.1 Gene: spoVK_2 Feature: domain Description: spore_V_K Location: 5904-6627 bp Feature: domain Description: spore_V_K Location: 5904-662 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PilE (COG4968), RVT-GII, GIIM (pfam08388), PulG (pfam11773), spore_V_K (TIGR02881)

Seq: LTBC01000038.1 Moorella mulderi DSM 14980 MOMU_contig000038, whole genome shotgun sequence (1970 bp)
Overview 1 RT 1: 1090-1937 bp Neighborhood of RT #1 [1090, 1937] RVT-GII RVT-GII Feature: gene Location: 1090-1197 bp Ori: KYH30467.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1093-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1093 -1186 bp Feature: gene Location: 1194-1466 bp Ori: KYH30468.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212-1449 bp Feature: gene Location: 1743-1937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII