myRT

myRT report for GCA_001596805.1_ASM159680v1

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Seq: LVIA01000083.1 Halomonas sp. KX33721 c134, whole genome shotgun sequence (1258 bp)
Overview 1 RT 1: 2-1052 bp Neighborhood of RT #1 [2, 1255] RVT-GII Feature: gene Location: 2-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1 052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVIA01000085.1 Halomonas sp. KX33721 c136, whole genome shotgun sequence (1700 bp)
Overview 1 RT 1: 76-1027 bp Neighborhood of RT #1 [76, 1374] RVT-GII Feature: gene Location: 76-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-102 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVIA01000087.1 Halomonas sp. KX33721 c138, whole genome shotgun sequence (1277 bp)
Overview 1 RT 1: 467-1277 bp Neighborhood of RT #1 [467, 1276] RVT-GII Feature: gene Location: 467-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-1277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVIA01000024.1 Halomonas sp. KX33721 c24, whole genome shotgun sequence (49772 bp)
Overview 1 RT 1: 1-3304 bp Neighborhood of RT #1 [1, 3312] RVT-GII GIIM sms PRK00943 Feature: gene Location: 1-720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-274 bp Feature: domain Description: GIIM Note: maturase Location: 325-541 bp Feature: domain Description: GIIM Note: maturase Location: 325-54 1 bp Feature: gene Location: 840-2210 bp Feature: domain Description: sms Location: 843-2199 bp Feature: domain Description: sms Location: 84 3-2199 bp Feature: gene Location: 2272-3312 bp Feature: domain Description: PRK00943 Location: 2278-3304 bp Feature: domain Description: PRK0094 3 Location: 2278-3304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), sms (TIGR00416), PRK00943 (selenide, water dikinase SelD)

Seq: LVIA01000026.1 Halomonas sp. KX33721 c26, whole genome shotgun sequence (98549 bp)
Overview 1 RT 1: 40-3336 bp Neighborhood of RT #1 [40, 3371] RVT-GII zf-ISL3 HTH_Tnp_ISL3 AAA-ATPase_like PDDEXK_9 Feature: gene Location: 40-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-946 bp Feature: gene Location: 1019-1648 bp Feature: domain Description: zf-ISL3 Location: 1160-1277 bp Feature: domain Description: zf-ISL3 Location: 1160-1277 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1301-1448 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1301-1448 bp Feature: gene Location: 1791-3371 bp Feature: domain Description: AAA-ATPase_like Location: 1821-2622 bp Feature: domain Description: AAA-ATPase_like Location: 1821-2622 bp Feature: domain Description: PDDEXK_9 Location: 3060-3336 bp Feature: domain Description: PDDEXK_9 Location: 3060-3336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: LVIA01000004.1 Halomonas sp. KX33721 c4, whole genome shotgun sequence (88831 bp)
Overview 1 RT 1: 2-3567 bp Neighborhood of RT #1 [2, 3635] RVT-GII COG4643 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 2-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-158 bp Feature: gene Location: 541-1440 bp Feature: domain Description: COG4643 Location: 637-1372 bp Feature: domain Description: COG46 43 Location: 6 37-1372 bp Feature: gene Location: 2310-3635 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2322-2589 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2322-2589 bp Feature: domain Description: INT_P4_C Location: 2979-3567 bp Feature: domain Description: INT_P4_C Location: 2979-356 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4643 (Uncharacterized domain associated with phage/plasmid primase ), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)

Seq: LVIA01000051.1 Halomonas sp. KX33721 c51, whole genome shotgun sequence (15107 bp)
Overview 1 RT 1: 1-2217 bp Neighborhood of RT #1 [1, 2217] RVT-GII GIIM Feature: gene Location: 1-249 bp Feature: gene Location: 420-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-1251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-1251 bp Feature: domain Description: GIIM Note: maturase Location: 1299-1524 bp Feature: domain Description: GIIM Note: maturase Location: 1299-1524 bp Feature: gene Location: 1658-1936 bp Feature: gene Location: 1969-2217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LVIA01000060.1 Halomonas sp. KX33721 c61, whole genome shotgun sequence (5576 bp)
Overview 1 RT 1: 3529-5532 bp Neighborhood of RT #1 [3529, 5573] HigB peroxid_rel RVT-GII GIIM RVT-GII Feature: gene Location: 3529-3678 bp Feature: domain Description: HigB Location: 3532-3640 bp Feature: domain Description: HigB Location: 3532-3640 bp Feature: gene Location: 3823-4410 bp Feature: domain Description: peroxid_rel Location: 3850-4375 bp Feature: domain Description: peroxid_rel Location: 38 50-4375 bp Feature: gene Location: 4591-5226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4597-4792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4597-4792 bp Feature: domain Description: GIIM Note: maturase Location: 4843-5059 bp Feature: domain Description: GIIM Note: maturase Location: 48 43-5059 bp Feature: gene Location: 5118-5573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5121-5532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5121-5532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB (COG4680), peroxid_rel (TIGR01926), RVT-GII, GIIM (pfam08388)

Seq: LVIA01000071.1 Halomonas sp. KX33721 c76, whole genome shotgun sequence (2584 bp)
Overview 1 RT 1: 1-2430 bp Neighborhood of RT #1 [1, 2430] RVT-GII GIIM PssA Feature: gene Location: 1-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-343 bp Feature: domain Description: GIIM Note: maturase Location: 394-610 bp Feature: domain Description: GIIM Note: maturase Location: 39 4-610 bp Feature: gene Location: 955-1842 bp Feature: domain Description: PssA Location: 1135-1816 bp Feature: domain Description: PssA Location: 1135-1816 bp Feature: gene Location: 2188-2430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PssA (COG1183)