myRT

myRT report for GCA_001596915.1_ASM159691v1

Download annotations/find similar RTs

Seq: JXIV01000046.1 Klebsiella pneumoniae strain KPOII-2 122992F-contig_46, whole genome shotgun sequence (126112 bp)
Overview 1 RT 1: 339-3372 bp Neighborhood of RT #1 [339, 3569] RVT-GII PRK10276 Feature: gene Location: 339-959 bp Feature: gene Location: 1451-2935 bp Ori: KYM07424.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-2543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 853-2543 bp Feature: gene Location: 3013-3252 bp Feature: gene Location: 3252-3569 bp Ori: KYM07425.1 Feature: domain Description: PRK10276 Location: 3258-3372 bp Feature: domain Description: PRK1 0276 Location: 3258-3372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JXIV01000027.1 Klebsiella pneumoniae strain KPOII-2 122992F-contig_27, whole genome shotgun sequence (152832 bp)
Overview 1 RT 1: 33532-38998 bp Neighborhood of RT #1 [33532, 39015] RVT-UG4 FimD FimC Feature: gene Location: 33532-35613 bp Ori: KYM10031.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33943-34387 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33943-34387 bp Feature: gene Location: 35610-38204 bp Ori: KYM10032.1 Feature: domain Description: FimD Location: 35652-38193 bp Feature: domain Description: FimD Location: 35652 -38193 bp Feature: gene Location: 38251-39015 bp Ori: KYM10033.1 Feature: domain Description: FimC Location: 38296-38998 bp Feature: domain Description: FimC Location: 382 96-38998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JXIV01000065.1 Klebsiella pneumoniae strain KPOII-2 122992F-contig_65, whole genome shotgun sequence (36442 bp)
Overview 1 RT 1: 372-3620 bp Neighborhood of RT #1 [372, 3622] RVT-GII PRK10276 umuC Feature: gene Location: 372-1856 bp Ori: KYM06401.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1935-2354 bp Ori: KYM06402.1 Feature: domain Description: PRK10276 Location: 1938-2349 bp Feature: domain Description: PRK10276 Location: 193 8-23 49 bp Feature: gene Location: 2357-3622 bp Ori: KYM06403.1 Feature: domain Description: umuC Location: 2360-3620 bp Feature: domain Description: umuC Location: 23 60-3 620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)