myRT

myRT report for GCA_001596935.1_ASM159693v1

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Seq: JUBN01000057.1 Klebsiella pneumoniae strain KPOII-1 186712J-contig_57, whole genome shotgun sequence (30902 bp)
Overview 1 RT 1: 1-3382 bp Neighborhood of RT #1 [1, 3579] RVT-GII PRK10276 Feature: gene Location: 1-202 bp Feature: gene Location: 349-969 bp Feature: gene Location: 1461-2945 bp Ori: KYL42271.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 863-2553 bp Feature: gene Location: 3023-3262 bp Feature: gene Location: 3262-3579 bp Ori: KYL42272.1 Feature: domain Description: PRK10276 Location: 3268-3382 bp Feature: domain Description: PRK1 0276 Location: 3268-3382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JUBN01000077.1 Klebsiella pneumoniae strain KPOII-1 186712J-contig_77, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 372-1464 bp Neighborhood of RT #1 [372, 1856] RVT-GII Feature: gene Location: 372-1856 bp Ori: KYL41842.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JUBN01000005.1 Klebsiella pneumoniae strain KPOII-1 186712J-contig_5, whole genome shotgun sequence (146453 bp)
Overview 1 RT 1: 33542-39008 bp Neighborhood of RT #1 [33542, 39025] RVT-UG4 FimD FimC Feature: gene Location: 33542-35623 bp Ori: KYL49655.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33953-34397 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 953 -3 43 97 bp Feature: gene Location: 35620-38214 bp Ori: KYL49656.1 Feature: domain Description: FimD Location: 35662-38203 bp Feature: domain Description: FimD Location: 3 5662-3 8203 bp Feature: gene Location: 38261-39025 bp Ori: KYL49657.1 Feature: domain Description: FimC Location: 38306-39008 bp Feature: domain Description: FimC Location: 3 83 06-3 9008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)