myRT

myRT report for GCA_001597165.1_ASM159716v1

Download annotations/find similar RTs

Seq: JXJA01000014.1 Klebsiella pneumoniae strain KPOII-9 365275Y-contig_14, whole genome shotgun sequence (146441 bp)
Overview 1 RT 1: 33536-39002 bp Neighborhood of RT #1 [33536, 39019] RVT-UG4 FimD FimC Feature: gene Location: 33536-35617 bp Ori: KYM14464.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33947-34391 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33947-34391 bp Feature: gene Location: 35614-38208 bp Ori: KYM14465.1 Feature: domain Description: FimD Location: 35656-38197 bp Feature: domain Description: FimD Location: 35656-381 97 bp Feature: gene Location: 38255-39019 bp Ori: KYM14466.1 Feature: domain Description: FimC Location: 38300-39002 bp Feature: domain Description: FimC Location: 38300-39002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JXJA01000042.1 Klebsiella pneumoniae strain KPOII-9 365275Y-contig_42, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 372-1464 bp Neighborhood of RT #1 [372, 1856] RVT-GII Feature: gene Location: 372-1856 bp Ori: KYM07309.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JXJA01000020.1 Klebsiella pneumoniae strain KPOII-9 365275Y-contig_20, whole genome shotgun sequence (126087 bp)
Overview 1 RT 1: 343-3376 bp Neighborhood of RT #1 [343, 3573] RVT-GII PRK10276 Feature: gene Location: 343-963 bp Feature: gene Location: 1455-2939 bp Ori: KYM12988.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2547 bp Feature: gene Location: 3017-3256 bp Feature: gene Location: 3256-3573 bp Ori: KYM12989.1 Feature: domain Description: PRK10276 Location: 3262-3376 bp Feature: domain Description: PRK10276 Location: 3 262-3 3 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)