myRT

myRT report for GCA_001597245.1_CLC_bio

Download annotations/find similar RTs

Seq: LDOY01000073.1 Klebsiella pneumoniae strain KP-10 127131n_contig_73, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 372-1464 bp Neighborhood of RT #1 [372, 1856] RVT-GII Feature: gene Location: 372-1856 bp Ori: KYM24118.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1 464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LDOY01000021.1 Klebsiella pneumoniae strain KP-10 127131n_contig_21, whole genome shotgun sequence (49469 bp)
Overview 1 RT 1: 340-3373 bp Neighborhood of RT #1 [340, 3570] RVT-GII PRK10276 Feature: gene Location: 340-960 bp Feature: gene Location: 1452-2936 bp Ori: KYM34802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2 544 bp Feature: gene Location: 3014-3253 bp Feature: gene Location: 3253-3570 bp Ori: KYM34803.1 Feature: domain Description: PRK10276 Location: 3259-3373 bp Feature: domain Description: PRK102 76 Location: 32 59-3373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: LDOY01000040.1 Klebsiella pneumoniae strain KP-10 127131n_contig_40, whole genome shotgun sequence (146435 bp)
Overview 1 RT 1: 33533-38999 bp Neighborhood of RT #1 [33533, 39016] RVT-UG4 FimD FimC Feature: gene Location: 33533-35614 bp Ori: KYM30265.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33944-34388 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 944-3 43 88 bp Feature: gene Location: 35611-38205 bp Ori: KYM30266.1 Feature: domain Description: FimD Location: 35653-38194 bp Feature: domain Description: FimD Location: 3 5653 -3 8194 bp Feature: gene Location: 38252-39016 bp Ori: KYM30267.1 Feature: domain Description: FimC Location: 38297-38999 bp Feature: domain Description: FimC Location: 3 8297-3 8999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)