myRT

myRT report for GCA_001597745.1_ASM159774v1

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Seq: LUHJ01000014.1 Anabaena sp. 4-3 contig016, whole genome shotgun sequence (206377 bp)
Overview 1 RT 1: 9609-17752 bp Neighborhood of RT #1 [9609, 17760] NorV RutF Uma2 RVT-UG16 ATPsyn_F1gamma atpA Feature: gene Location: 9609-11348 bp Feature: domain Description: NorV Location: 9672-10833 bp Feature: domain Description: NorV Location: 9672-1 0833 bp Feature: domain Description: RutF Location: 10887-11343 bp Feature: domain Description: RutF Location: 1 0887-1 1 343 bp Feature: gene Location: 12624-13262 bp Feature: domain Description: Uma2 Location: 12705-13131 bp Feature: domain Description: Uma2 Location: 1 2705-1 31 31 bp Feature: gene Location: 13500-14972 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 13863-14262 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 3863-1 4262 bp Feature: gene Location: 15194-16189 bp Feature: domain Description: ATPsyn_F1gamma Location: 15251-16184 bp Feature: domain Description: ATPsyn_F1 gamma Location: 1 5251 -1 61 84 bp Feature: gene Location: 16240-17760 bp Feature: domain Description: atpA Location: 16312-17752 bp Feature: domain Description: atpA Location: 1 631 2-1 7752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NorV (COG0426), RutF (TIGR03615), Uma2 (pfam05685), RVT-UG16, ATPsyn_F1gamma (TIGR01146), atpA (TIGR00962)

Seq: LUHJ01000017.1 Anabaena sp. 4-3 contig024, whole genome shotgun sequence (155404 bp)
Overview 1 RT 1: 74940-80614 bp 2 RT 2: 125734-130014 bp Neighborhood of RT #1 [74940, 80614] desat_CrtD HTH_OrfB_IS605 RVT_N RVT-GII RVT-GII GIIM McrA InsQ Neighborhood of RT #2 [125734, 130014] tspaseT_teng_N RVT_N RVT-GII GIIM HNH InsQ Feature: gene Location: 74940-76454 bp Feature: domain Description: desat_CrtD Location: 74976-76446 bp Feature: domain Description: desat_CrtD Location: 74976-76446 bp Feature: gene Location: 76483-76638 bp Feature: domain Description: HTH_OrfB_IS605 Location: 76486-76588 bp Feature: domain Description: HTH_OrfB_IS605 Location: 76486-76588 bp Feature: gene Location: 77181-78029 bp Feature: domain Description: RVT_N Location: 77217-77463 bp Feature: domain Description: RVT_N Location: 772 17-77463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77505-78027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77505-7802 7 bp Feature: gene Location: 78016-79011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78028-78178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7802 8-78178 bp Feature: domain Description: GIIM Note: maturase Location: 78280-78514 bp Feature: domain Description: GIIM Note: maturase Location: 782 80-78514 bp Feature: domain Description: McrA Location: 78577-78877 bp Feature: domain Description: McrA Location: 78577-78877 bp Feature: gene Location: 79109-80194 bp Feature: domain Description: InsQ Location: 79115-80042 bp Feature: domain Description: InsQ Location: 79115-80042 bp Feature: gene Location: 80255-80614 bp Feature: gene Location: 125734-126063 bp Feature: domain Description: tspaseT_teng_N Location: 125752-125953 bp Feature: domain Description: tspaseT_teng_N Location: 12 5752 -12 5953 bp Feature: gene Location: 126213-126395 bp Feature: gene Location: 126644-128362 bp Feature: domain Description: RVT_N Location: 126680-126926 bp Feature: domain Description: RVT_N Location: 12 6680-12 692 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126968-127640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6968-12 7640 bp Feature: domain Description: GIIM Note: maturase Location: 127742-127973 bp Feature: domain Description: GIIM Note: maturase Location: 12 7742 -12 7973 bp Feature: domain Description: HNH Note: nucleases Location: 128198-128336 bp Feature: domain Description: HNH Note: nucleases Location: 12 8198-12 8336 bp Feature: gene Location: 128394-129344 bp Feature: domain Description: InsQ Location: 128541-129219 bp Feature: domain Description: InsQ Location: 12 8541-12 92 19 bp Feature: gene Location: 129823-130014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT desat_CrtD (TIGR02733), HTH_OrfB_IS605 (pfam12323), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675), tspaseT_teng_N (TIGR01765), HNH (pfam01844)

Seq: LUHJ01000064.1 Anabaena sp. 4-3 contig174, whole genome shotgun sequence (80792 bp)
Overview 1 RT 1: 43003-49127 bp Neighborhood of RT #1 [43003, 49189] InsQ RVT_N RVT-GII GIIM HNH COG4402 NqrB NqrB Feature: gene Location: 43003-43242 bp Feature: gene Location: 43481-44197 bp Feature: domain Description: InsQ Location: 43493-44150 bp Feature: domain Description: InsQ Location: 43 493 -44150 bp Feature: gene Location: 44752-46503 bp Feature: domain Description: RVT_N Location: 44821-45067 bp Feature: domain Description: RVT_N Location: 44821-45067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45109-45781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45109-45781 bp Feature: domain Description: GIIM Note: maturase Location: 45883-46114 bp Feature: domain Description: GIIM Note: maturase Location: 45883 -46114 bp Feature: domain Description: HNH Note: nucleases Location: 46339-46477 bp Feature: domain Description: HNH Note: nucleases Location: 463 3 9-46477 bp Feature: gene Location: 46827-48200 bp Feature: domain Description: COG4402 Location: 46830-48180 bp Feature: domain Description: COG4402 Location: 4683 0-48180 bp Feature: gene Location: 48224-49189 bp Feature: domain Description: NqrB Location: 48230-48374 bp Feature: domain Description: NqrB Location: 4823 0-483 74 bp Feature: domain Description: NqrB Location: 48524-49127 bp Feature: domain Description: NqrB Location: 48524-49127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG4402 (Uncharacterized protein ), NqrB (COG1805)