myRT

myRT report for GCA_001597935.1_ASM159793v1

Download annotations/find similar RTs

Seq: LOBR01000031.1 Vibrio cidicii strain 2538-88 Contig_175, whole genome shotgun sequence (8056 bp)
Overview 1 RT 1: 2972-6935 bp Neighborhood of RT #1 [2972, 6937] RelE YiaG RVT-UG11 DUF3465 Feature: gene Location: 2972-3304 bp Ori: KYN88959.1 Feature: domain Description: RelE Location: 2975-3248 bp Feature: domain Description: RelE Location: 2975-3248 bp Feature: gene Location: 3291-3605 bp Ori: KYN88960.1 Feature: domain Description: YiaG Location: 3297-3588 bp Feature: domain Description: YiaG Location: 3297-3588 bp Feature: gene Location: 4715-5482 bp Ori: KYN88961.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4847-5300 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4847-5300 bp Feature: gene Location: 5970-6389 bp Feature: gene Location: 6542-6937 bp Ori: KYN88963.1 Feature: domain Description: DUF3465 Location: 6578-6935 bp Feature: domain Description: DUF3465 Location: 6578-6935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), YiaG (COG2944), RVT-UG11, DUF3465 (pfam11948)

Seq: LOBR01000070.1 Vibrio cidicii strain 2538-88 Contig_32, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 564-1632 bp Neighborhood of RT #1 [564, 1856] RVT-GII GIIM Feature: gene Location: 564-1856 bp Ori: KYN85345.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762 -1374 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1632 bp Feature: domain Description: GIIM Note: maturase Location: 142 8-1632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)