myRT

myRT report for GCA_001597945.1_ASM159794v1

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Seq: LOBQ01000072.1 Vibrio cidicii strain 2423-01, whole genome shotgun sequence (125634 bp)
Overview 1 RT 1: 71817-75582 bp Neighborhood of RT #1 [71817, 76643] group_II_RT_mat RVT-GII HTH_26 HsdM Feature: gene Location: 71817-72071 bp Feature: gene Location: 72976-73311 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 73066-73279 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 73066-73279 bp Feature: gene Location: 73293-73514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73296-73506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73296-73506 bp Feature: gene Location: 73989-74213 bp Feature: domain Description: HTH_26 Location: 74004-74190 bp Feature: domain Description: HTH_26 Location: 74004-741 90 bp Feature: gene Location: 74223-76643 bp Feature: domain Description: HsdM Location: 74235-75582 bp Feature: domain Description: HsdM Location: 74235-75582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HTH_26 (pfam13443), HsdM (COG0286)

Seq: LOBQ01000095.1 Vibrio cidicii strain 2423-01, whole genome shotgun sequence (116954 bp)
Overview 1 RT 1: 113006-116724 bp Neighborhood of RT #1 [113006, 116948] PRK13503 Maltoporin-like RVT-GII GIIM Feature: gene Location: 113006-113875 bp Feature: domain Description: PRK13503 Location: 113087-113864 bp Feature: domain Description: PRK13503 Location: 113087-113864 bp Feature: gene Location: 114039-115322 bp Feature: domain Description: Maltoporin-like Location: 114132-115320 bp Feature: domain Description: Maltoporin-like Location: 114132 -11532 0 bp Feature: gene Location: 115656-116948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115854-116466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115854-116466 bp Feature: domain Description: GIIM Note: maturase Location: 116520-116724 bp Feature: domain Description: GIIM Note: maturase Location: 11652 0-11672 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13503 (HTH-type transcriptional activator RhaS), Maltoporin-like (cd01346), RVT-GII, GIIM (pfam08388)

Seq: LOBQ01000014.1 Vibrio cidicii strain 2423-01, whole genome shotgun sequence (1335 bp)
Overview 1 RT 1: 37-1105 bp Neighborhood of RT #1 [37, 1329] RVT-GII GIIM Feature: gene Location: 37-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235-847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 5-847 bp Feature: domain Description: GIIM Note: maturase Location: 901-1105 bp Feature: domain Description: GIIM Note: maturase Location: 901-1105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LOBQ01000084.1 Vibrio cidicii strain 2423-01, whole genome shotgun sequence (106540 bp)
Overview 1 RT 1: 100230-106301 bp Neighborhood of RT #1 [100230, 106525] PRK05297 DUF3622 RVT-GII GIIM Feature: gene Location: 100230-104138 bp Feature: domain Description: PRK05297 Location: 100233-104133 bp Feature: domain Description: PRK05297 Location: 100233-104 133 bp Feature: gene Location: 104297-104614 bp Feature: domain Description: DUF3622 Location: 104300-104507 bp Feature: domain Description: DUF3622 Location: 104 300-104 507 bp Feature: gene Location: 105233-106525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105431-106043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054 31-10604 3 bp Feature: domain Description: GIIM Note: maturase Location: 106097-106301 bp Feature: domain Description: GIIM Note: maturase Location: 106097-106301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional), DUF3622 (pfam12286), RVT-GII, GIIM (pfam08388)