myRT

myRT report for GCA_001601595.1_ASM160159v1

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Seq: LOHK01000091.1 Pseudomonas aeruginosa strain 105738 LT20_contig000091, whole genome shotgun sequence (49137 bp)
Overview 1 RT 1: 731-6167 bp Neighborhood of RT #1 [731, 6358] ATPgrasp_ST ATPgrasp_Ter IS5 RVT-GII GIIM IS5 MnuA_DNase1-like Feature: gene Location: 731-1978 bp Feature: domain Description: ATPgrasp_ST Location: 1292-1484 bp Feature: domain Description: ATPgrasp_ST Location: 1 292-1 484 bp Feature: domain Description: ATPgrasp_Ter Location: 1580-1955 bp Feature: domain Description: ATPgrasp_Ter Location: 1 580-1 955 bp Feature: gene Location: 2484-3017 bp Feature: domain Description: IS5 Location: 2547-2991 bp Feature: domain Description: IS5 Location: 2547-2991 bp Feature: gene Location: 3014-4282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227-3884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227-3884 bp Feature: domain Description: GIIM Note: maturase Location: 3962-4184 bp Feature: domain Description: GIIM Note: maturase Location: 3962-41 84 bp Feature: gene Location: 4775-5314 bp Feature: domain Description: IS5 Location: 4964-5291 bp Feature: domain Description: IS5 Location: 4964-5291 bp Feature: gene Location: 5354-6358 bp Feature: domain Description: MnuA_DNase1-like Location: 5429-6167 bp Feature: domain Description: MnuA_DNase1 -like Location: 5429-61 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388), MnuA_DNase1-like (cd10283), ATPgrasp_ST (pfam14397), ATPgrasp_Ter (pfam15632)

Seq: LOHK01000043.1 Pseudomonas aeruginosa strain 105738 LT20_contig000043, whole genome shotgun sequence (47117 bp)
Overview 1 RT 1: 39057-44362 bp Neighborhood of RT #1 [39057, 44362] DUF4354 RVT-Retrons HATPase_c_3 Feature: gene Location: 39057-39437 bp Feature: domain Description: DUF4354 Location: 39060-39426 bp Feature: domain Description: DUF4354 Location: 39060-3942 6 bp Feature: gene Location: 40210-41157 bp Feature: gene Location: 41154-42107 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41265-41859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 412 65-41859 bp Feature: gene Location: 42480-44243 bp Feature: domain Description: HATPase_c_3 Location: 42519-42705 bp Feature: domain Description: HATPase_c_3 Location: 42 519-42 705 bp Feature: gene Location: 44240-44362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4354 (pfam14263), RVT-Retrons, HATPase_c_3 (pfam13589)