myRT

myRT report for GCA_001602775.1_ASM160277v1

Download annotations/find similar RTs

Seq: LUYS01000255.1 Bacteroidales bacterium Bact_01 Bact_01_contig_105509, whole genome shotgun sequence (2601 bp)
Overview 1 RT 1: 1-2598 bp Neighborhood of RT #1 [1, 2598] RVT-GII RVT-GII GIIM Feature: gene Location: 1-513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-51 4 bp Feature: gene Location: 880-2319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 95-1 81 3 bp Feature: domain Description: GIIM Note: maturase Location: 1873-2101 bp Feature: domain Description: GIIM Note: maturase Location: 1 873-21 01 bp Feature: gene Location: 2413-2598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LUYS01000295.1 Bacteroidales bacterium Bact_01 Bact_01_contig_125295, whole genome shotgun sequence (10509 bp)
Overview 1 RT 1: 21-9304 bp Neighborhood of RT #1 [21, 9390] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII GIIM HTH_17 Feature: gene Location: 21-467 bp Feature: domain Description: DUF1896 Location: 54-456 bp Feature: domain Description: DUF1896 Location: 54-456 bp Feature: gene Location: 454-5388 bp Feature: domain Description: N6_Mtase Location: 751-1399 bp Feature: domain Description: N6_Mtase Location: 751-1399 bp Feature: domain Description: COG4646 Location: 2830-5002 bp Feature: domain Description: COG4646 Location: 2 830-5002 bp Feature: gene Location: 6024-7679 bp Feature: domain Description: RVT_N Location: 6078-6321 bp Feature: domain Description: RVT_N Location: 6078-632 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6366-7014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6366-7014 bp Feature: domain Description: GIIM Note: maturase Location: 7068-7299 bp Feature: domain Description: GIIM Note: maturase Location: 7068-72 99 bp Feature: gene Location: 7685-8965 bp Feature: gene Location: 9037-9390 bp Feature: domain Description: HTH_17 Location: 9169-9304 bp Feature: domain Description: HTH_17 Location: 9169-9304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_17 (pfam12728)

Seq: LUYS01000011.1 Bacteroidales bacterium Bact_01 Bact_01_contig_7663, whole genome shotgun sequence (4210 bp)
Overview 1 RT 1: 3-3851 bp Neighborhood of RT #1 [3, 4207] RVT-UG2 PRK11331 Feature: gene Location: 3-1511 bp Feature: gene Location: 1524-1655 bp Feature: gene Location: 1755-3173 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1974-2814 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1974-2814 bp Feature: gene Location: 3170-4207 bp Feature: domain Description: PRK11331 Location: 3566-3851 bp Feature: domain Description: PRK113 3 1 Location: 3 566-3 851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional)