myRT

myRT report for GCA_001605745.1_ASM160574v1

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Seq: AKYH01000011.1 Escherichia coli EPEC11 EPEC11_12, whole genome shotgun sequence (257364 bp)
Overview 1 RT 1: 114679-118558 bp Neighborhood of RT #1 [114679, 118563] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 114679-115137 bp Feature: domain Description: dut Location: 114685-115132 bp Feature: domain Description: dut Location: 1 1 4685-1 1 51 32 bp Feature: gene Location: 115244-115840 bp Feature: domain Description: slmA Location: 115250-115826 bp Feature: domain Description: slmA Location: 1 1 5250-1 1 5826 bp Feature: gene Location: 115884-116843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116019-116568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 601 9-1 1 6568 bp Feature: gene Location: 117140-117796 bp Feature: domain Description: pyrE Location: 117158-117791 bp Feature: domain Description: pyrE Location: 1 1 71 58-1 1 7791 bp Feature: gene Location: 117847-118563 bp Feature: domain Description: rph Location: 117850-118558 bp Feature: domain Description: rph Location: 1 1 7850-1 1 8558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: AKYH01000152.1 Escherichia coli EPEC11 EPEC11_153, whole genome shotgun sequence (6842 bp)
Overview 1 RT 1: 1201-5535 bp Neighborhood of RT #1 [1201, 5720] RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 1201-1431 bp Feature: gene Location: 1599-2060 bp Feature: gene Location: 2483-3418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2585-3185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 585-3185 bp Feature: gene Location: 3415-5067 bp Feature: domain Description: COG3950 Location: 3613-5029 bp Feature: domain Description: COG3950 Location: 3613-502 9 bp Feature: gene Location: 5070-5720 bp Feature: domain Description: TIGR02646 Location: 5136-5535 bp Feature: domain Description: TIGR02 646 Location: 5136-5535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)