myRT

myRT report for GCA_001606165.1_ASM160616v1

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Seq: LRQU01000001.1 Serratia plymuthica strain A153 s_plymuthica_A153_A, whole genome shotgun sequence (3081744 bp)
Overview 1 RT 1: 45132-55158 bp 2 RT 2: 2307092-2311213 bp Neighborhood of RT #1 [45132, 55158] SpoVK RVT-UG4 RVT-UG4 Av_adeno_fibre Av_adeno_fibre Av_adeno_fibre Av_adeno_fibre Neighborhood of RT #2 [2307092, 2311272] PRK15287 FimA RVT-UG4 CadC1 Feature: gene Location: 45132-47354 bp Ori: KYQ96991.1 Feature: domain Description: SpoVK Location: 46554-47274 bp Feature: domain Description: SpoVK Location: 46554-47274 bp Feature: gene Location: 47351-49084 bp Feature: gene Location: 49174-49803 bp Ori: KYQ96993.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49531-49792 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49531 -49792 bp Feature: gene Location: 49813-50196 bp Ori: KYQ96994.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 49816-49969 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4981 6-49969 bp Feature: gene Location: 50172-52007 bp Ori: KYQ96995.1 Feature: domain Description: Av_adeno_fibre Location: 50340-50430 bp Feature: domain Description: Av_adeno_fibre Location: 50340-50430 bp Feature: domain Description: Av_adeno_fibre Location: 50436-50526 bp Feature: domain Description: Av_adeno_fibre Location: 50436-50526 bp Feature: domain Description: Av_adeno_fibre Location: 50541-50625 bp Feature: domain Description: Av_adeno_fibre Location: 50541 -50625 bp Feature: domain Description: Av_adeno_fibre Location: 50634-50730 bp Feature: domain Description: Av_adeno_fibre Location: 50634-50730 bp Feature: gene Location: 52078-55158 bp Feature: gene Location: 2307092-2307580 bp Ori: KYQ98873.1 Feature: domain Description: PRK15287 Location: 2307140-2307578 bp Feature: domain Description: PRK1 5287 Location: 23071 40-2307578 bp Feature: gene Location: 2307595-2308143 bp Ori: KYQ99615.1 Feature: domain Description: FimA Location: 2307643-2308141 bp Feature: domain Description: FimA Location: 2307643-23081 41 bp Feature: gene Location: 2308136-2309116 bp Ori: KYQ98874.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2308478-2308922 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2308478-2308922 bp Feature: gene Location: 2309204-2310016 bp Feature: gene Location: 2310886-2311272 bp Ori: KYQ98876.1 Feature: domain Description: CadC1 Location: 2310901-2311213 bp Feature: domain Description: CadC1 Location: 231 0901 -231 1 21 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVK (COG0464), RVT-UG4, Av_adeno_fibre (pfam06536), PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), CadC1 (COG3710)